RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 APOA5Q6Q788 366 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 ALG1Q9BT22 464 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 KCND1Q9NSA2 647 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 IMPACTQ9P2X3 320 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 ZHX1Q9UKY1 873 aaPredicted RBP18.87■□□□□ 0.61
LTBR-201ENST00000228918 ZNF532Q9HCE3 1301 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 IRS4O14654 1257 aaPredicted RBP18.86■□□□□ 0.61
LTBR-201ENST00000228918 IDH1O75874 414 aaKnown RBP18.86■□□□□ 0.61
LTBR-201ENST00000228918 PDE8BO95263 885 aa18.86■□□□□ 0.61
LTBR-201ENST00000228918 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
LTBR-201ENST00000228918 VPS37DQ86XT2 251 aa18.86■□□□□ 0.61
LTBR-201ENST00000228918 PDE6AP16499 860 aa18.86■□□□□ 0.61
LTBR-201ENST00000228918 PHKA1P46020 1223 aa18.86■□□□□ 0.61
LTBR-201ENST00000228918 DOCK2Q92608 1830 aa18.86■□□□□ 0.61
LTBR-201ENST00000228918 TCRBV5S4A2TA0A5A2 114 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 CDC27P30260 824 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 CCDC102BQ68D86 513 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 KRT40Q6A162 431 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 TMEM87BQ96K49 555 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 TIGD1Q96MW7 591 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 B4E1Z4 1266 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 BIN1O00499 593 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 APPP05067 770 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 RXRAP19793 462 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 MARCKSP29966 332 aaPredicted RBP18.85■□□□□ 0.61
LTBR-201ENST00000228918 NCAPHQ15003 741 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 PTPN14Q15678 1187 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 CCAR2Q8N163 923 aaKnown RBP18.85■□□□□ 0.61
LTBR-201ENST00000228918 XPO4Q9C0E2 1151 aaKnown RBP18.85■□□□□ 0.61
LTBR-201ENST00000228918 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
LTBR-201ENST00000228918 PPP6R2O75170 966 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 CPLX2Q6PUV4 134 aaKnown RBP18.84■□□□□ 0.61
LTBR-201ENST00000228918 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 HPSEQ9Y251 543 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 UQCRFS1P1P0C7P4 283 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 PTPAQ15257 358 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 PHKBQ93100 1093 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 IFNKQ9P0W0 207 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 TRMT112Q9UI30 125 aaKnown RBP18.84■□□□□ 0.61
LTBR-201ENST00000228918 TIAM2Q8IVF5 1701 aa18.84■□□□□ 0.61
LTBR-201ENST00000228918 PDE8AO60658 829 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 SMC2O95347 1197 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.61
LTBR-201ENST00000228918 TPM4P67936 248 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 ALX1Q15699 326 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 NTRK3Q16288 839 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 SGMS1Q86VZ5 419 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 IGDCC4Q8TDY8 1250 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 ZNF592Q92610 1267 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 STRBPQ96SI9 672 aaKnown RBP18.83■□□□□ 0.61
LTBR-201ENST00000228918 LY9Q9HBG7 655 aa18.83■□□□□ 0.61
LTBR-201ENST00000228918 FAM237AA0A1B0GTK4 181 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 ZBTB43O43298 467 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 SYKP43405 635 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 HSPA2P54652 639 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 JMYQ8N9B5 988 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 CCDC150Q8NCX0 1101 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
LTBR-201ENST00000228918 TUBE1Q9UJT0 475 aa18.83■□□□□ 0.6
LTBR-201ENST00000228918 IKBKBO14920 756 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
LTBR-201ENST00000228918 FGFR2P21802 821 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
LTBR-201ENST00000228918 SHC4Q6S5L8 630 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 TMC6Q7Z403 805 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 ZBTB1Q9Y2K1 713 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 BCL9O00512 1426 aa18.82■□□□□ 0.6
LTBR-201ENST00000228918 GOLGA8AA7E2F4 631 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 U2AF2P26368 475 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■■■ 28.8
LTBR-201ENST00000228918 CBX1P83916 185 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 LPIN2Q92539 896 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
LTBR-201ENST00000228918 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
LTBR-201ENST00000228918 TRMT1Q9NXH9 659 aaKnown RBP18.81■□□□□ 0.6
LTBR-201ENST00000228918 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
LTBR-201ENST00000228918 ARMCX5Q6P1M9 558 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 STK36Q9NRP7 1315 aa18.81■□□□□ 0.6
LTBR-201ENST00000228918 SLIT2O94813 1529 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 GNL2Q13823 731 aaKnown RBP18.8■□□□□ 0.6
LTBR-201ENST00000228918 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 RESP18Q5W5W9 173 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 LIFRP42702 1097 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 NAA30Q147X3 362 aaPredicted RBP18.8■□□□□ 0.6
LTBR-201ENST00000228918 HSD3B7Q9H2F3 369 aa18.8■□□□□ 0.6
LTBR-201ENST00000228918 DISP2A7MBM2 1401 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 NID2Q14112 1375 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
LTBR-201ENST00000228918 KIF2AO00139 706 aaPredicted RBP18.79■□□□□ 0.6
LTBR-201ENST00000228918 DHX8Q14562 1220 aaKnown RBP18.79■□□□□ 0.6
LTBR-201ENST00000228918 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms