RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 BCAMP50895 628 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 ESR2Q92731 530 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 MST1RQ04912 1400 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 CCDC150Q8NCX0 1101 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
UBE2D4-201ENST00000222402 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.34
UBE2D4-201ENST00000222402 CCP110O43303 1012 aa17.21■□□□□ 0.34
UBE2D4-201ENST00000222402 DPCR1Q3MIW9 517 aa17.21■□□□□ 0.34
UBE2D4-201ENST00000222402 COL15A1P39059 1388 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 TMTC2Q8N394 836 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 LRRC37A3O60309 1634 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 KIF2AO00139 706 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 AKNAD1Q5T1N1 836 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 MB21D2Q8IYB1 491 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 GNAT2P19087 354 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
UBE2D4-201ENST00000222402 MAGEB6P1A0A0J9YX57 407 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 PRDM1O75626 825 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 MRFAP1L1Q96HT8 127 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 POLR3EQ9NVU0 708 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 NLRP12P59046 1061 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 ARID5BQ14865 1188 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 LRRC8AQ8IWT6 810 aa17.19■□□□□ 0.34
UBE2D4-201ENST00000222402 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 CMA1P23946 247 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 AFMP43652 599 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 FILIP1LQ4L180 1135 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 PRKAB2O43741 272 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 MYL5Q02045 173 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 PNOCQ13519 176 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 CABP5Q9NP86 173 aa17.18■□□□□ 0.34
UBE2D4-201ENST00000222402 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 FANCCQ00597 558 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 CYB5R4Q7L1T6 521 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 PPFIBP1Q86W92 1011 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 ZMYND15Q9H091 742 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
UBE2D4-201ENST00000222402 SH2B2O14492 632 aaPredicted RBP17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 CCDC144BQ3MJ40 725 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 CPLX3Q8WVH0 158 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 DHX58Q96C10 678 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 CCDC94Q9BW85 323 aaPredicted RBP17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 ZSWIM5Q9P217 1185 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 NLRP5P59047 1200 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
UBE2D4-201ENST00000222402 TXLNAP40222 546 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 TSR1Q2NL82 804 aaKnown RBP17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 STRBPQ96SI9 672 aaKnown RBP17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 SLIT3O75094 1523 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 TSPY2A6NKD2 308 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 CUTAO60888 179 aa17.15■□□□□ 0.34
UBE2D4-201ENST00000222402 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms