RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 FOCADQ5VW36 1801 aa23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 GPR75-ASB3A0A0A6YYF3 556 aa23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 DYNLL1P63167 89 aaKnown RBP23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 LRRFIP1Q32MZ4 808 aaKnown RBP23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 TDRD3Q9H7E2 651 aaKnown RBP23.49■■□□□ 1.35
SNAPC2-201ENST00000221573 POTEIP0CG38 1075 aa23.48■■□□□ 1.35
SNAPC2-201ENST00000221573 POTEJP0CG39 1038 aa23.48■■□□□ 1.35
SNAPC2-201ENST00000221573 TMED8Q6PL24 325 aaPredicted RBP23.48■■□□□ 1.35
SNAPC2-201ENST00000221573 APPBP2Q92624 585 aa23.48■■□□□ 1.35
SNAPC2-201ENST00000221573 PUS7LQ9H0K6 701 aaKnown RBP23.48■■□□□ 1.35
SNAPC2-201ENST00000221573 CLRN2A0PK11 232 aa23.47■■□□□ 1.35
SNAPC2-201ENST00000221573 ZNF784Q8NCA9 323 aaPredicted RBP23.47■■□□□ 1.35
SNAPC2-201ENST00000221573 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
SNAPC2-201ENST00000221573 FAM227BQ96M60 508 aa23.47■■□□□ 1.35
SNAPC2-201ENST00000221573 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
SNAPC2-201ENST00000221573 NMIQ13287 307 aaPredicted RBP23.46■■□□□ 1.35
SNAPC2-201ENST00000221573 ZMYM1Q5SVZ6 1142 aa23.46■■□□□ 1.35
SNAPC2-201ENST00000221573 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
SNAPC2-201ENST00000221573 PNMA8AQ86V59 439 aaPredicted RBP23.46■■□□□ 1.35
SNAPC2-201ENST00000221573 RIOK1Q9BRS2 568 aaKnown RBP23.46■■□□□ 1.35
SNAPC2-201ENST00000221573 A0A0D9SFI3 127 aa23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 M0R2C6 588 aa23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 RHBDL3P58872 404 aa23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 NOL10Q9BSC4 688 aaKnown RBP23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 USP40Q9NVE5 1235 aa23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 GGA3Q9NZ52 723 aa23.45■■□□□ 1.34
SNAPC2-201ENST00000221573 MAGEB6P1A0A0J9YX57 407 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 BAG3O95817 575 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 CACNB3P54284 484 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 PPP4CP60510 307 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 SPDYE2Q495Y8 402 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 TICAM2Q86XR7 235 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 LCORLQ8N3X6 602 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 SH3RF3Q8TEJ3 882 aaPredicted RBP23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 DIAPH3Q9NSV4 1193 aa23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 ZNF70Q9UC06 446 aaPredicted RBP23.44■■□□□ 1.34
SNAPC2-201ENST00000221573 KIF3CO14782 793 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 MYO1BO43795 1136 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 MBD4O95243 580 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 ANGEL2Q5VTE6 544 aaKnown RBP23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 ARMT1Q9H993 441 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 SCAF8Q9UPN6 1271 aaKnown RBP23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 NAV1Q8NEY1 1877 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 HIP1O00291 1037 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 CHMLP26374 656 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 CWC27Q6UX04 472 aaKnown RBP23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 VEZTQ9HBM0 779 aa23.43■■□□□ 1.34
SNAPC2-201ENST00000221573 CCDC129Q6ZRS4 1044 aa23.42■■□□□ 1.34
SNAPC2-201ENST00000221573 AIDAQ96BJ3 306 aa23.42■■□□□ 1.34
SNAPC2-201ENST00000221573 CLEC11AQ9Y240 323 aa23.42■■□□□ 1.34
SNAPC2-201ENST00000221573 NFIAQ12857 509 aa23.41■■□□□ 1.34
SNAPC2-201ENST00000221573 TEX11Q8IYF3 940 aa23.41■■□□□ 1.34
SNAPC2-201ENST00000221573 IL25Q9H293 177 aa23.41■■□□□ 1.34
SNAPC2-201ENST00000221573 HELLSQ9NRZ9 838 aa23.41■■□□□ 1.34
SNAPC2-201ENST00000221573 BAZ2AQ9UIF9 1905 aaKnown RBP23.41■■□□□ 1.34
SNAPC2-201ENST00000221573 MYH1P12882 1939 aa23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 GPAA1O43292 621 aa23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 WDHD1O75717 1129 aaPredicted RBP23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 PLCG2P16885 1265 aa23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 ZC3H15Q8WU90 426 aaKnown RBP23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 TMOD2Q9NZR1 351 aa23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 PGAP2Q9UHJ9 254 aa23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 DDX60LQ5H9U9 1706 aaKnown RBP23.4■■□□□ 1.34
SNAPC2-201ENST00000221573 TCP10L2B9ZVM9 353 aa23.39■■□□□ 1.34
SNAPC2-201ENST00000221573 MCMDC2Q4G0Z9 681 aa23.39■■□□□ 1.34
SNAPC2-201ENST00000221573 ZNF589Q86UQ0 364 aaPredicted RBP23.39■■□□□ 1.34
SNAPC2-201ENST00000221573 LDHDQ86WU2 507 aa23.39■■□□□ 1.34
SNAPC2-201ENST00000221573 DDX4Q9NQI0 724 aaKnown RBP23.39■■□□□ 1.34
SNAPC2-201ENST00000221573 PITPNM2Q9BZ72 1349 aa23.39■■□□□ 1.33
SNAPC2-201ENST00000221573 CDC45O75419 566 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 CERS3Q8IU89 383 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 STRBPQ96SI9 672 aaKnown RBP23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 PRKAB2O43741 272 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 PICALMQ13492 652 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 MAP1SQ66K74 1059 aaPredicted RBP23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 TGFBRAP1Q8WUH2 860 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 SDR42E1Q8WUS8 393 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 DCPSQ96C86 337 aaKnown RBP23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 IDI2Q9BXS1 227 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
SNAPC2-201ENST00000221573 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
SNAPC2-201ENST00000221573 APOBEC3FQ8IUX4 373 aaKnown RBP23.37■■□□□ 1.33
SNAPC2-201ENST00000221573 CRNKL1Q9BZJ0 848 aaKnown RBP23.37■■□□□ 1.33
SNAPC2-201ENST00000221573 CCDC171Q6TFL3 1326 aa23.36■■□□□ 1.33
SNAPC2-201ENST00000221573 TCP10Q12799 353 aa23.36■■□□□ 1.33
SNAPC2-201ENST00000221573 MAPKAPK5Q8IW41 473 aa23.36■■□□□ 1.33
SNAPC2-201ENST00000221573 SLC4A4Q9Y6R1 1079 aa23.36■■□□□ 1.33
SNAPC2-201ENST00000221573 FLT1P17948 1338 aa23.36■■□□□ 1.33
SNAPC2-201ENST00000221573 ADM5C9JUS6 153 aa23.35■■□□□ 1.33
SNAPC2-201ENST00000221573 USP5P45974 858 aa23.35■■□□□ 1.33
SNAPC2-201ENST00000221573 DLK2Q6UY11 383 aa23.35■■□□□ 1.33
SNAPC2-201ENST00000221573 ZFPM1Q8IX07 1006 aa23.35■■□□□ 1.33
SNAPC2-201ENST00000221573 RAD50Q92878 1312 aa23.35■■□□□ 1.33
SNAPC2-201ENST00000221573 VPS53Q5VIR6 699 aa23.34■■□□□ 1.33
SNAPC2-201ENST00000221573 FKBP1CQ5VVH2 108 aa23.34■■□□□ 1.33
SNAPC2-201ENST00000221573 KRT26Q7Z3Y9 468 aa23.34■■□□□ 1.33
SNAPC2-201ENST00000221573 RUFY2Q8WXA3 655 aa23.34■■□□□ 1.33
SNAPC2-201ENST00000221573 GLIS2Q9BZE0 524 aaPredicted RBP23.34■■□□□ 1.33
SNAPC2-201ENST00000221573 SIPA1L1O43166 1804 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms