RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 SV2BQ7L1I2 683 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 CTNND2Q9UQB3 1225 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 ZNF75DP51815 510 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 ALDH3A1P30838 453 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 STAMQ92783 540 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 RSRC1Q96IZ7 334 aaKnown RBP16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 GDAP1L1Q96MZ0 367 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 EYA1Q99502 592 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 BACH1O14867 736 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 CCDC65Q8IXS2 484 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 CARD14Q9BXL6 1004 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 PKD2L1Q9P0L9 805 aa16.78■□□□□ 0.28
NDFIP2-201ENST00000218652 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 BIRC3Q13489 604 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 SLC27A2O14975 620 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 ZNF202O95125 648 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 A0A1B0GUL7 405 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 INPP5BP32019 993 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 ST5P78524 1137 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 TTF2Q9UNY4 1162 aaKnown RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.28
NDFIP2-201ENST00000218652 MAGEA1P43355 309 aa16.77■□□□□ 0.27
NDFIP2-201ENST00000218652 SEL1L2Q5TEA6 688 aa16.77■□□□□ 0.27
NDFIP2-201ENST00000218652 PIK3AP1Q6ZUJ8 805 aa16.77■□□□□ 0.27
NDFIP2-201ENST00000218652 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.27
NDFIP2-201ENST00000218652 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.27
NDFIP2-201ENST00000218652 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 NDUFB9Q9Y6M9 179 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 ZNF445P59923 1031 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 CFAP157Q5JU67 520 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 LRRC45Q96CN5 670 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 NAP1L3Q99457 506 aaPredicted RBP16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 ECM2O94769 699 aaPredicted RBP16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 STMN2Q93045 179 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 CABS1Q96KC9 395 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 SGSM2O43147 1006 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 HSPA1LP34931 641 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 PLCD1P51178 756 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
NDFIP2-201ENST00000218652 TNFAIP3P21580 790 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 SLC9C1Q4G0N8 1177 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 TESK2Q96S53 571 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 ACTN4O43707 911 aaKnown RBP16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 PCK1P35558 622 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 TXKP42681 527 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 KIAA1524Q8TCG1 905 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 ADGRL1O94910 1474 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 A0A1B0GUA9 196 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 MPHOSPH6Q99547 160 aaKnown RBP16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 TSGA10Q9BZW7 698 aa16.75■□□□□ 0.27
NDFIP2-201ENST00000218652 CEP104O60308 925 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 TPD52P55327 224 aaPredicted RBP16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 CYP26C1Q6V0L0 522 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 KLHL7Q8IXQ5 586 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 PHKBQ93100 1093 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 LMBRD1Q9NUN5 540 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 MTX1Q13505 466 aa16.74■□□□□ 0.27
NDFIP2-201ENST00000218652 ZNF365Q70YC5 407 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms