RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CASC1Q6TDU7 716 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 PRMT6Q96LA8 375 aaPredicted RBP32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 HELLSQ9NRZ9 838 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 BAG3O95817 575 aa32.79■■■□□ 2.84
CHMP4B-201ENST00000217402 CCDC129Q6ZRS4 1044 aa32.79■■■□□ 2.84
CHMP4B-201ENST00000217402 AIDAQ96BJ3 306 aa32.79■■■□□ 2.84
CHMP4B-201ENST00000217402 ARMT1Q9H993 441 aa32.79■■■□□ 2.84
CHMP4B-201ENST00000217402 LCORLQ8N3X6 602 aa32.78■■■□□ 2.84
CHMP4B-201ENST00000217402 MTMR14Q8NCE2 650 aa32.78■■■□□ 2.84
CHMP4B-201ENST00000217402 RIOK1Q9BRS2 568 aaKnown RBP32.78■■■□□ 2.84
CHMP4B-201ENST00000217402 ADARB2Q9NS39 739 aaKnown RBP32.78■■■□□ 2.84
CHMP4B-201ENST00000217402 IQCA1LA6NCM1 817 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 NBPF9Q3BBW0 867 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 MCMDC2Q4G0Z9 681 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 IL25Q9H293 177 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 POTECB2RU33 542 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 WNT10BO00744 389 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 EPHX2P34913 555 aa32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 ZBED3Q96IU2 234 aaPredicted RBP32.77■■■□□ 2.84
CHMP4B-201ENST00000217402 GPAA1O43292 621 aa32.76■■■□□ 2.83
CHMP4B-201ENST00000217402 ZNF589Q86UQ0 364 aaPredicted RBP32.76■■■□□ 2.83
CHMP4B-201ENST00000217402 SH3RF3Q8TEJ3 882 aaPredicted RBP32.76■■■□□ 2.83
CHMP4B-201ENST00000217402 RUFY2Q8WXA3 655 aa32.76■■■□□ 2.83
CHMP4B-201ENST00000217402 TDRD3Q9H7E2 651 aaKnown RBP32.76■■■□□ 2.83
CHMP4B-201ENST00000217402 CDC42EP5Q6NZY7 148 aa32.75■■■□□ 2.83
CHMP4B-201ENST00000217402 RRAGCQ9HB90 399 aa32.75■■■□□ 2.83
CHMP4B-201ENST00000217402 USP40Q9NVE5 1235 aa32.75■■■□□ 2.83
CHMP4B-201ENST00000217402 SCN4AP35499 1836 aa32.75■■■□□ 2.83
CHMP4B-201ENST00000217402 PPP4CP60510 307 aa32.74■■■□□ 2.83
CHMP4B-201ENST00000217402 TAF1DQ9H5J8 278 aaPredicted RBP32.74■■■□□ 2.83
CHMP4B-201ENST00000217402 CLRN2A0PK11 232 aa32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 RHBDL3P58872 404 aa32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 ESYT1Q9BSJ8 1104 aa32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 NMRK2Q9NPI5 230 aa32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 HIRAP54198 1017 aaPredicted RBP32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 CACNB3P54284 484 aa32.73■■■□□ 2.83
CHMP4B-201ENST00000217402 ASTN2O75129 1339 aaPredicted RBP32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 CCDC171Q6TFL3 1326 aa32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 RAD50Q92878 1312 aa32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 MYO1BO43795 1136 aa32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 PLCG2P16885 1265 aa32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 TEX11Q8IYF3 940 aa32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 STRBPQ96SI9 672 aaKnown RBP32.72■■■□□ 2.83
CHMP4B-201ENST00000217402 SGSM2O43147 1006 aa32.71■■■□□ 2.83
CHMP4B-201ENST00000217402 EAPPQ56P03 285 aaPredicted RBP32.7■■■□□ 2.83
CHMP4B-201ENST00000217402 CERS3Q8IU89 383 aa32.7■■■□□ 2.83
CHMP4B-201ENST00000217402 CRNKL1Q9BZJ0 848 aaKnown RBP32.7■■■□□ 2.83
CHMP4B-201ENST00000217402 ZNF70Q9UC06 446 aaPredicted RBP32.7■■■□□ 2.83
CHMP4B-201ENST00000217402 PRKAB2O43741 272 aa32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 VEGFAP15692 232 aaPredicted RBP32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 SPDYE2Q495Y8 402 aa32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 USP50Q70EL3 339 aaPredicted RBP32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 VEZTQ9HBM0 779 aa32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 SLC4A4Q9Y6R1 1079 aa32.69■■■□□ 2.82
CHMP4B-201ENST00000217402 MFAP1P55081 439 aaKnown RBP32.68■■■□□ 2.82
CHMP4B-201ENST00000217402 C8orf34Q49A92 452 aa32.68■■■□□ 2.82
CHMP4B-201ENST00000217402 SDR42E1Q8WUS8 393 aa32.68■■■□□ 2.82
CHMP4B-201ENST00000217402 TMOD2Q9NZR1 351 aa32.68■■■□□ 2.82
CHMP4B-201ENST00000217402 PICALMQ13492 652 aa32.67■■■□□ 2.82
CHMP4B-201ENST00000217402 VPS53Q5VIR6 699 aa32.67■■■□□ 2.82
CHMP4B-201ENST00000217402 TGFBRAP1Q8WUH2 860 aa32.67■■■□□ 2.82
CHMP4B-201ENST00000217402 GGA3Q9NZ52 723 aa32.67■■■□□ 2.82
CHMP4B-201ENST00000217402 WDHD1O75717 1129 aaPredicted RBP32.66■■■□□ 2.82
CHMP4B-201ENST00000217402 USP5P45974 858 aa32.66■■■□□ 2.82
CHMP4B-201ENST00000217402 NFIAQ12857 509 aa32.66■■■□□ 2.82
CHMP4B-201ENST00000217402 ANGEL2Q5VTE6 544 aaKnown RBP32.66■■■□□ 2.82
CHMP4B-201ENST00000217402 SCAF8Q9UPN6 1271 aaKnown RBP32.66■■■□□ 2.82
CHMP4B-201ENST00000217402 ECM29Q5VYK3 1845 aa32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 TCP10L2B9ZVM9 353 aa32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 GNAT2P19087 354 aa32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 YY1P25490 414 aa32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 PNMA8AQ86V59 439 aaPredicted RBP32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 MAPKAPK5Q8IW41 473 aa32.65■■■□□ 2.82
CHMP4B-201ENST00000217402 APPP05067 770 aa32.64■■■□□ 2.82
CHMP4B-201ENST00000217402 GPBP1L1Q9HC44 474 aaPredicted RBP32.64■■■□□ 2.82
CHMP4B-201ENST00000217402 DDX4Q9NQI0 724 aaKnown RBP32.64■■■□□ 2.82
CHMP4B-201ENST00000217402 ANO2Q9NQ90 1003 aa32.63■■■□□ 2.81
CHMP4B-201ENST00000217402 FOXP2O15409 715 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 POTEIP0CG38 1075 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 POTEJP0CG39 1038 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 TCP10Q12799 353 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 FLT1P17948 1338 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 CDK5RAP2Q96SN8 1893 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 GSG1L2A8MUP6 293 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 HSPD1P10809 573 aaKnown RBP32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 KIAA1211Q6ZU35 1233 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 IDI2Q9BXS1 227 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 FAM198AQ9UFP1 575 aa32.62■■■□□ 2.81
CHMP4B-201ENST00000217402 EPB41L4AQ9HCS5 686 aaPredicted RBP32.61■■■□□ 2.81
CHMP4B-201ENST00000217402 PATL2C9JE40 543 aaKnown RBP32.6■■■□□ 2.81
CHMP4B-201ENST00000217402 PTH1RQ03431 593 aa32.6■■■□□ 2.81
CHMP4B-201ENST00000217402 DCP1AQ9NPI6 582 aaPredicted RBP32.6■■■□□ 2.81
CHMP4B-201ENST00000217402 CLEC11AQ9Y240 323 aa32.6■■■□□ 2.81
CHMP4B-201ENST00000217402 APOBEC3FQ8IUX4 373 aaKnown RBP32.59■■■□□ 2.81
CHMP4B-201ENST00000217402 DDRGK1Q96HY6 314 aa32.59■■■□□ 2.81
CHMP4B-201ENST00000217402 ATP8A2Q9NTI2 1148 aa32.59■■■□□ 2.81
CHMP4B-201ENST00000217402 SAP30BPQ9UHR5 308 aaKnown RBP32.59■■■□□ 2.81
CHMP4B-201ENST00000217402 FOCADQ5VW36 1801 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 CNTNAP1P78357 1384 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 TDO2P48775 406 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms