RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
VRK1-201ENST00000216639 WDR66Q8TBY9 1149 aa20.43■□□□□ 0.86
VRK1-201ENST00000216639 NSUN4Q96CB9 384 aaKnown RBP20.43■□□□□ 0.86
VRK1-201ENST00000216639 ZSCAN16Q9H4T2 348 aaPredicted RBP20.43■□□□□ 0.86
VRK1-201ENST00000216639 NEDD4P46934 1319 aa20.43■□□□□ 0.86
VRK1-201ENST00000216639 KLRG2A4D1S0 409 aaPredicted RBP20.42■□□□□ 0.86
VRK1-201ENST00000216639 SH2B2O14492 632 aaPredicted RBP20.42■□□□□ 0.86
VRK1-201ENST00000216639 CTDNEP1O95476 244 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 ZNF445P59923 1031 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 MECOMQ03112 1051 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 ZSCAN23Q3MJ62 389 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 GIMAP6Q6P9H5 292 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 CYB5R4Q7L1T6 521 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 TXNRD3Q86VQ6 643 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 NCOA5Q9HCD5 579 aaKnown RBP20.42■□□□□ 0.86
VRK1-201ENST00000216639 GPHNQ9NQX3 736 aaPredicted RBP20.42■□□□□ 0.86
VRK1-201ENST00000216639 BRPF3Q9ULD4 1205 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 SALL1Q9NSC2 1324 aa20.42■□□□□ 0.86
VRK1-201ENST00000216639 CPLX1O14810 134 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 FIBPO43427 364 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 UBE2HP62256 183 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 SART3Q15020 963 aaKnown RBP20.41■□□□□ 0.86
VRK1-201ENST00000216639 MTA3Q9BTC8 594 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
VRK1-201ENST00000216639 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 GPSM2P81274 684 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 PPARAQ07869 468 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 FERMT3Q86UX7 667 aa20.41■□□□□ 0.86
VRK1-201ENST00000216639 CHD4Q14839 1912 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 UFL1O94874 794 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 LIFRP42702 1097 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 TMEM67Q5HYA8 995 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 COL23A1Q86Y22 540 aaPredicted RBP20.4■□□□□ 0.86
VRK1-201ENST00000216639 DZIP1Q86YF9 867 aaKnown RBP20.4■□□□□ 0.86
VRK1-201ENST00000216639 TDRD7Q8NHU6 1098 aaKnown RBP20.4■□□□□ 0.86
VRK1-201ENST00000216639 SDR42E1Q8WUS8 393 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 ANAPC4Q9UJX5 808 aa20.4■□□□□ 0.86
VRK1-201ENST00000216639 KDM4AO75164 1064 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 CDKL5O76039 1030 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.86
VRK1-201ENST00000216639 NFXL1Q6ZNB6 911 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 CRNKL1Q9BZJ0 848 aaKnown RBP20.39■□□□□ 0.86
VRK1-201ENST00000216639 SCAND2PQ9GZW5 306 aaPredicted RBP20.39■□□□□ 0.86
VRK1-201ENST00000216639 GRPEL1Q9HAV7 217 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 TOMM22Q9NS69 142 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 HPS5Q9UPZ3 1129 aa20.39■□□□□ 0.86
VRK1-201ENST00000216639 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 ERICH2A1L162 156 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.85
VRK1-201ENST00000216639 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.85
VRK1-201ENST00000216639 SGMS1Q86VZ5 419 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 PODXL2Q9NZ53 605 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 ZSWIM5Q9P217 1185 aa20.39■□□□□ 0.85
VRK1-201ENST00000216639 TCHHQ07283 1943 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 MINDY4BA8MYZ0 360 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 GADD45BO75293 160 aaPredicted RBP20.38■□□□□ 0.85
VRK1-201ENST00000216639 LDHBP07195 334 aaKnown RBP20.38■□□□□ 0.85
VRK1-201ENST00000216639 PCP11498 1178 aaKnown RBP20.38■□□□□ 0.85
VRK1-201ENST00000216639 PRDX5P30044 214 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 METAP2P50579 478 aaKnown RBP eCLIP20.38■□□□□ 0.85
VRK1-201ENST00000216639 GSTO1P78417 241 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
VRK1-201ENST00000216639 SYNE3Q6ZMZ3 975 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 ZNF384Q8TF68 577 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 TMEM63CQ9P1W3 806 aa20.38■□□□□ 0.85
VRK1-201ENST00000216639 RBM27Q9P2N5 1060 aaKnown RBP20.38■□□□□ 0.85
VRK1-201ENST00000216639 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
VRK1-201ENST00000216639 TMTC2Q8N394 836 aa20.37■□□□□ 0.85
VRK1-201ENST00000216639 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
VRK1-201ENST00000216639 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
VRK1-201ENST00000216639 ELP1O95163 1332 aa20.37■□□□□ 0.85
VRK1-201ENST00000216639 ZBTB43O43298 467 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 RESTQ13127 1097 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 SP8Q8IXZ3 490 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 ESR2Q92731 530 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
VRK1-201ENST00000216639 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
VRK1-201ENST00000216639 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
VRK1-201ENST00000216639 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
VRK1-201ENST00000216639 PDE6BP35913 854 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 GAS2L3Q86XJ1 694 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 CFAP45Q9UL16 551 aa20.36■□□□□ 0.85
VRK1-201ENST00000216639 LDHCP07864 332 aa20.35■□□□□ 0.85
VRK1-201ENST00000216639 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
VRK1-201ENST00000216639 UBAC1Q9BSL1 405 aa20.35■□□□□ 0.85
VRK1-201ENST00000216639 CD209Q9NNX6 404 aa20.35■□□□□ 0.85
VRK1-201ENST00000216639 ORC3Q9UBD5 711 aaPredicted RBP20.35■□□□□ 0.85
VRK1-201ENST00000216639 NRXN2Q9P2S2 1712 aa20.34■□□□□ 0.85
VRK1-201ENST00000216639 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms