RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 CYB5R4Q7L1T6 521 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
SNAPC1-201ENST00000216294 GPAA1O43292 621 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 KCNQ2O43526 872 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 PNOCQ13519 176 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 FBXO38Q6PIJ6 1188 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 FOXN1O15353 648 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 FAM177A1Q8N128 213 aaPredicted RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 CIAO1O76071 339 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
SNAPC1-201ENST00000216294 RFX7Q2KHR2 1363 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 CSF1RP07333 972 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 CDC27P30260 824 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 CRKLP46109 303 aaKnown RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 SIK1P57059 783 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 ITPK1Q13572 414 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 NCAPHQ15003 741 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 ERCC6LQ2NKX8 1250 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 CMTR1Q8N1G2 835 aaKnown RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 HELBQ8NG08 1087 aaPredicted RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 TMEM232C9JQI7 657 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 KIF23Q02241 960 aaPredicted RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 GREM2Q9H772 168 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
SNAPC1-201ENST00000216294 ZNF213O14771 459 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 MCAMP43121 646 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 ANO1Q5XXA6 986 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 KIF18AQ8NI77 898 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 HSD3B7Q9H2F3 369 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 B4E1Z4 1266 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 IRS4O14654 1257 aaPredicted RBP18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
SNAPC1-201ENST00000216294 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 CAVIN2O95810 425 aa18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 NGLY1Q96IV0 654 aa18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 EPC1Q9H2F5 836 aa18.33■□□□□ 0.53
SNAPC1-201ENST00000216294 CTSWP56202 376 aa18.33■□□□□ 0.52
SNAPC1-201ENST00000216294 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 FANCGO15287 622 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 ITGA6P23229 1130 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 SLC9C2Q5TAH2 1124 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 OGFRQ9NZT2 677 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 GRIN1Q05586 938 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 SHC4Q6S5L8 630 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 ZNF771Q7L3S4 317 aaPredicted RBP18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
SNAPC1-201ENST00000216294 FANCCQ00597 558 aa18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 VPS37DQ86XT2 251 aa18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 ZNF446Q9NWS9 450 aa18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 ATP2B1P20020 1258 aa18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
SNAPC1-201ENST00000216294 SFPQP23246 707 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 NLRP12P59046 1061 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 UTP14CQ5TAP6 766 aaKnown RBP18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 KRT40Q6A162 431 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 GRAMD1CQ8IYS0 662 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 ZNF34Q8IZ26 560 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 KCNQ4P56696 695 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 PDE4BQ07343 736 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 LONRF3Q496Y0 759 aa18.3■□□□□ 0.52
SNAPC1-201ENST00000216294 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms