RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
APOBEC3D-201ENST00000216099 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
APOBEC3D-201ENST00000216099 MAST3O60307 1309 aa12.52□□□□□ -0.41
APOBEC3D-201ENST00000216099 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 JAZF1Q86VZ6 243 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 PDE8BO95263 885 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 ME3Q16798 604 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 CLEC4GQ6UXB4 293 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
APOBEC3D-201ENST00000216099 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 NTSR2O95665 410 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 MRE11P49959 708 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 ST3GAL1Q11201 340 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 TOB2Q14106 344 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 HIC1Q14526 733 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 TAF6LQ9Y6J9 622 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 MBD3O95983 291 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 CYP21A2P08686 494 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 FGFR2P21802 821 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 TTF1Q15361 905 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 CCDC83Q8IWF9 413 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 MYH13Q9UKX3 1938 aa12.5□□□□□ -0.41
APOBEC3D-201ENST00000216099 STX6O43752 255 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 CHGBP05060 677 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 OSBPP22059 807 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 IGBP1P78318 339 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 APPBP2Q92624 585 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 A0A0G2JS52 829 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 KCNQ2O43526 872 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 SYT1P21579 422 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 ZNF445P59923 1031 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 FBXO33Q7Z6M2 555 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 LPIN2Q92539 896 aa12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOBEC3D-201ENST00000216099 M0R2C6 588 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 GJB2P29033 226 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 ZAP70P43403 619 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 SCARF1Q14162 830 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 QPCTQ16769 361 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 ATP6V1DQ9Y5K8 247 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 CTNNA3Q9UI47 895 aa12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
APOBEC3D-201ENST00000216099 ATG7O95352 703 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 F13A1P00488 732 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 SLC5A1P13866 664 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 PDCP20941 246 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 CLCN1P35523 988 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 MCAMP43121 646 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 ZFYVE27Q5T4F4 411 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 RPUSD2Q8IZ73 545 aaKnown RBP12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 AGXT2Q9BYV1 514 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 TAF1P21675 1872 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 KIF4AO95239 1232 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 XRCC6P12956 609 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 STOX1Q6ZVD7 989 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 DHX32Q7L7V1 743 aaKnown RBP12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 FBXL16Q8N461 479 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
APOBEC3D-201ENST00000216099 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
APOBEC3D-201ENST00000216099 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
APOBEC3D-201ENST00000216099 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.41
APOBEC3D-201ENST00000216099 ADD2P35612 726 aa12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 EXOSC10Q01780 885 aaKnown RBP12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 CCDC102BQ68D86 513 aa12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 GTF3C6Q969F1 213 aa12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.42
APOBEC3D-201ENST00000216099 SH3BP5O60239 455 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 Q6ZUG5 572 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms