RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 FGAP02671 866 aa17.25■□□□□ 0.35
SRRD-201ENST00000215917 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
SRRD-201ENST00000215917 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
SRRD-201ENST00000215917 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
SRRD-201ENST00000215917 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
SRRD-201ENST00000215917 PRC1O43663 620 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 PDE8AO60658 829 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 SLU7O95391 586 aaKnown RBP17.24■□□□□ 0.35
SRRD-201ENST00000215917 TAF3Q5VWG9 929 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 GPR108Q9NPR9 543 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 DENND2AQ9ULE3 1009 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 SPATA31A5Q5VU36 1347 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 SPATA31A7Q8IWB4 1347 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 ZNF213O14771 459 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 GPAA1O43292 621 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
SRRD-201ENST00000215917 EIF5P55010 431 aaKnown RBP17.24■□□□□ 0.35
SRRD-201ENST00000215917 NSUN7Q8NE18 718 aaKnown RBP17.24■□□□□ 0.35
SRRD-201ENST00000215917 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 RIPOR2Q9Y4F9 1068 aa17.24■□□□□ 0.35
SRRD-201ENST00000215917 ARID5BQ14865 1188 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 PAXBP1Q9Y5B6 917 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
SRRD-201ENST00000215917 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 PUF60Q9UHX1 559 aaKnown RBP17.23■□□□□ 0.35
SRRD-201ENST00000215917 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
SRRD-201ENST00000215917 PHKA1P46020 1223 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 IFNKQ9P0W0 207 aa17.23■□□□□ 0.35
SRRD-201ENST00000215917 MCAMP43121 646 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
SRRD-201ENST00000215917 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
SRRD-201ENST00000215917 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 CDCA7Q9BWT1 371 aaPredicted RBP17.22■□□□□ 0.35
SRRD-201ENST00000215917 PDIA3P30101 505 aaKnown RBP17.22■□□□□ 0.35
SRRD-201ENST00000215917 MICU3Q86XE3 530 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 ORC3Q9UBD5 711 aaPredicted RBP17.22■□□□□ 0.35
SRRD-201ENST00000215917 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 ITGB4P16144 1822 aa17.22■□□□□ 0.35
SRRD-201ENST00000215917 A0A1B0GVL5 298 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 FAM107BQ9H098 131 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 AP5Z1O43299 807 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 RESTQ13127 1097 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 ZNF397Q8NF99 534 aaPredicted RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 CCDC12Q8WUD4 166 aaPredicted RBP17.21■□□□□ 0.35
SRRD-201ENST00000215917 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
SRRD-201ENST00000215917 TJP1Q07157 1748 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 PFKFB2O60825 505 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 KRBA2Q6ZNG9 492 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 HINFPQ9BQA5 517 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRRD-201ENST00000215917 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 TSGA10IPQ3SY00 556 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
SRRD-201ENST00000215917 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
SRRD-201ENST00000215917 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
SRRD-201ENST00000215917 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 PDE8BO95263 885 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
SRRD-201ENST00000215917 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 TERF1P54274 439 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 CASQ1P31415 396 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 CCDC102BQ68D86 513 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 GPIHBP1Q8IV16 184 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 GDAP1L1Q96MZ0 367 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 PLCD4Q9BRC7 762 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 LZTFL1Q9NQ48 299 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 ST7Q9NRC1 585 aa17.19■□□□□ 0.34
SRRD-201ENST00000215917 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
SRRD-201ENST00000215917 B4E1Z4 1266 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 APPBP2Q92624 585 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 RHOXF2BP0C7M4 288 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 RHOXF2Q9BQY4 288 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 CAPN2P17655 700 aa17.18■□□□□ 0.34
SRRD-201ENST00000215917 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms