RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 AKAP11Q9UKA4 1901 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 ZSCAN30Q86W11 494 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 ZNF384Q8TF68 577 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 TDO2P48775 406 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 RASSF7Q02833 373 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 SLC27A2O14975 620 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 FGAP02671 866 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 TGFB2P61812 414 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
CD4-201ENST00000011653 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 ZDHHC9Q9Y397 364 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 IRS2Q9Y4H2 1338 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 CYP2D7A0A087X1C5 515 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 HSPA4P34932 840 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 UBE3CQ15386 1083 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 RRP12Q5JTH9 1297 aaKnown RBP12.47□□□□□ -0.41
CD4-201ENST00000011653 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
CD4-201ENST00000011653 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
CD4-201ENST00000011653 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
CD4-201ENST00000011653 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 MSNP26038 577 aaKnown RBP12.46□□□□□ -0.41
CD4-201ENST00000011653 ANAPC15P60006 121 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 CYP21A2P08686 494 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 NAPBQ9H115 298 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
CD4-201ENST00000011653 SEMA3EO15041 775 aa12.46□□□□□ -0.42
CD4-201ENST00000011653 CERS5Q8N5B7 392 aa12.46□□□□□ -0.42
CD4-201ENST00000011653 GPT2Q8TD30 523 aa12.46□□□□□ -0.42
CD4-201ENST00000011653 STRBPQ96SI9 672 aaKnown RBP12.46□□□□□ -0.42
CD4-201ENST00000011653 MBD3O95983 291 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 SPTY2D1Q68D10 685 aaPredicted RBP12.45□□□□□ -0.42
CD4-201ENST00000011653 CHMP4CQ96CF2 233 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 IL1R1P14778 569 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 PICALMQ13492 652 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
CD4-201ENST00000011653 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
CD4-201ENST00000011653 CACNB3P54284 484 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 EVX2Q03828 476 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 USP5P45974 858 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 CUL4AQ13619 759 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 SCAF8Q9UPN6 1271 aaKnown RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 ZNF213O14771 459 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 FOXP2O15409 715 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 MAPKAPK5Q8IW41 473 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
CD4-201ENST00000011653 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
CD4-201ENST00000011653 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 PRDM1O75626 825 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 TPM2P07951 284 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 BTDP43251 543 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
CD4-201ENST00000011653 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
CD4-201ENST00000011653 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
CD4-201ENST00000011653 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 CHD4Q14839 1912 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 BRD1O95696 1058 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 CC2D2BQ6DHV5 1058 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
CD4-201ENST00000011653 MYH13Q9UKX3 1938 aa12.43□□□□□ -0.42
CD4-201ENST00000011653 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 STK3Q13188 491 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 BLOC1S2Q6QNY1 142 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 STOX1Q6ZVD7 989 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms