RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Stat5bP42232 786 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sptlc2P97363 560 aaKnown RBP11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Epha2Q03145 977 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Nyap1Q6PFX7 833 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sept9Q80UG5 583 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Gja10Q9WUS4 505 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Phrf1A6H619 1682 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ltbp1Q8CG19 1712 aa11.82□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dock5B2RY04 1868 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ankrd63A2ARS0 390 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Izumo3A6PWV3 263 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Tpm3P21107 285 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 U2af2P26369 475 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Slc7a3P70423 618 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Myl10Q62082 202 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Agtpbp1Q641K1 1218 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cyp24a1Q64441 514 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Krt40Q6IFX3 439 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sec62Q8BU14 398 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Kiaa0319lQ8K135 1048 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Hps3Q91VB4 1002 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Stk38Q91VJ4 465 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Bap1Q99PU7 728 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ccdc47Q9D024 483 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cnpy3Q9DAU1 276 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Znf638Q61464 1960 aaKnown RBP11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 EvplQ9D952 2035 aa11.81□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cplx2P84086 134 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Acnat2Q8BGG9 420 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Eno4Q8C042 619 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CrebrfQ8CDG5 640 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Inpp5bQ8K337 993 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Golph3lQ8R088 285 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 McamQ8R2Y2 648 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Nop14Q8R3N1 860 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 NenfQ9CQ45 171 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cxcl11Q9JHH5 100 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dennd3A2RT67 1274 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sema6bO54951 886 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Prl7d1P04769 244 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Pde11aP0C1Q2 933 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dhx40Q6PE54 779 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Vps37dQ810I0 261 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 9230110C19RikQ8CC70 267 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CpvlQ9D3S9 478 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 ParvgQ9ERD8 331 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Suclg2Q9Z2I8 433 aa11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CoblQ5NBX1 1337 aaKnown RBP11.8□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 NcapgE9PWG6 1004 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Heg1E9Q7X6 1337 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Atp2b1G5E829 1220 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Tuft1O08970 390 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Bnip3O55003 187 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Casp1P29452 402 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Sec23aQ01405 765 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 IntuQ059U7 942 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Gse1Q3U3C9 1213 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Cypt2Q6P924 180 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Rbm15bQ6PHZ5 887 aaKnown RBP11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Terb1Q8C0V1 768 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Lrrc2Q8VDB8 371 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Nop2Q922K7 793 aaKnown RBP11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Irs4Q9Z0Y7 1216 aa11.79□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Aox3G3X982 1335 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Pde4bB1AWC9 736 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dnm1P39053 867 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Nucb2P81117 420 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 PcQ05920 1178 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Fam170aQ66LM6 333 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Rnf41Q8BH75 317 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 CerkQ8K4Q7 531 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 HmcesQ8R1M0 353 aaKnown RBP11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dbndd1Q9CZ00 160 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ripk4Q9ERK0 786 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 NesQ6P5H2 1864 aaKnown RBP11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Znf609Q8BZ47 1413 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 XpcP51612 930 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Ncbp1Q3UYV9 790 aaKnown RBP11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Olfr118Q7TRJ6 321 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Dnaaf2Q8BPI1 814 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Q8BZJ8 459 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Afg3l2Q8JZQ2 802 aaKnown RBP11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Hnrnpul1Q8VDM6 859 aaKnown RBP11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Syt10Q9R0N4 523 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 Tbc1d8Q9Z1A9 1134 aa11.78□□□□□ -0.52
Cpsf3-211ENSMUST00000222968 4930523C07RikE9Q2T4 99 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Celf1P28659 486 aaKnown RBP11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Cdk4P30285 303 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Pfkfb1P70266 471 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Spata5Q3UMC0 893 aaKnown RBP11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Pcdhb14Q6PB90 796 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Glis3Q6XP49 780 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 IqcgQ80W32 419 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Srp68Q8BMA6 625 aaKnown RBP11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Ttc12Q8BW49 704 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Zfp202Q8C879 641 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 MlphQ91V27 590 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Nrbp1Q99J45 535 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Tlcd1Q99JT6 247 aa11.77□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 WtapQ9ER69 396 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms