RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Cdc37Q61081 379 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Gbp4Q61107 620 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Me3Q8BMF3 604 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Ttc12Q8BW49 704 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Usp16Q99LG0 825 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 MrgbpQ9DAT2 204 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Actn2Q9JI91 894 aa10.1□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Etnk2A7MCT6 385 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Psmd1Q3TXS7 953 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Iws1Q8C1D8 766 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Ppfibp1Q8C8U0 969 aaKnown RBP10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 BlmhQ8R016 455 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Pla2g4aP47713 748 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 VeztQ3ZK22 780 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Ggt6Q6PDE7 497 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Necab1Q8BG18 352 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Aldh5a1Q8BWF0 523 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 4930449I24RikQ9D5E3 319 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Q9D9S1 216 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Clip2Q9Z0H8 1047 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Clec11aO88200 328 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Anapc15P60007 132 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Dpf2Q61103 391 aaKnown RBP10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 NntQ61941 1086 aaKnown RBP10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Rad17Q6NXW6 688 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 Fermt3Q8K1B8 665 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 TkfcQ8VC30 578 aa10.09□□□□□ -0.79
Prpf40a-208ENSMUST00000210789 LtkP08923 888 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Specc1lQ2KN98 1118 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ovgp1Q62010 721 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Klhl23Q6GQU2 558 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccdc50Q810U5 305 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Hps6Q8BLY7 805 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Iffo2Q8R2V2 512 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 2310002L09RikQ9D7L5 217 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Myo1eE9Q634 1107 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Pde8aO88502 823 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 RpsaP14206 295 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Nat1P50294 290 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 IntuQ059U7 942 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ankrd40Q5SUE8 363 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zranb3Q6NZP1 1069 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cd209bQ8CJ91 325 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Nat10Q8K224 1024 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccer1Q9CQL2 403 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccdc130Q9D516 385 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gkap1Q9JMB0 366 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Tpx2A2APB8 745 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 MaeaQ4VC33 396 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Sdad1Q80UZ2 687 aaKnown RBP10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zfp113Q8C689 439 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Lrrc42Q8R2U7 421 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Mtmr6Q8VE11 617 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rabgef1Q9JM13 491 aa10.08□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 PaskQ8CEE6 1383 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gm6588E9Q3K0 461 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gm3415J3QMS8 315 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gigyf2Q6Y7W8 1291 aaKnown RBP10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ddx54Q8K4L0 874 aaKnown RBP10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 ZgpatQ8VDM1 511 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 BaatQ91X34 420 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Kif9Q9WV04 790 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Knop1Q9Z2Q2 478 aaKnown RBP10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Scn4aQ9ER60 1841 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gm15262A0A140LIQ5 728 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Stim1P70302 685 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rnf20Q5DTM8 973 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Igf2bp2Q5SF07 592 aaKnown RBP10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Mybpc2Q5XKE0 1136 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Bsdc1Q80Y55 427 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Als2cr12Q8BVM7 383 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Amigo3Q8C2S7 508 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ints4Q8CIM8 964 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gtpbp10Q8K013 366 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Amotl2Q8K371 772 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 SncbQ91ZZ3 133 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 D430041D05RikF6ZGR6 1678 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rgs12Q8CGE9 1381 aa10.07□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ag2Q3UPL5 249 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Iqcb1Q8BP00 598 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccdc80Q8R2G6 949 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ebag9Q9D0V7 213 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Pdcd6ipQ9WU78 869 aaKnown RBP10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 A0A1W2P6Q8 802 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gm9048A0A1W2P7H4 802 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 A0A1W2P7S8 802 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 A0A1W2P7Z8 802 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gm9046A0A1W2P855 802 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cdc5lQ6A068 802 aaKnown RBP10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccdc148Q6P5U8 527 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ctdp1Q7TSG2 960 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Adcy3Q8VHH7 1145 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Casz1Q9CWL2 1761 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Phlpp1Q8CHE4 1687 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Enc1O35709 589 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zbtb45Q52KG4 520 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ppp4r3aQ6P2K6 820 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 AopepQ8BXQ6 817 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 LgsnQ8CIX8 563 aa10.06□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ms4a2P20490 235 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms