RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Nop53Q8BK35 484 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cfap53Q9D439 514 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 FancaQ9JL70 1439 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Spocd1B1ASB6 936 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Brpf3B2KF05 1204 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Fam186bD3Z420 943 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Anxa1P10107 346 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Adam1aQ60813 791 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Nop2Q922K7 793 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Pde4dQ01063 747 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Wdr70Q3TWF6 657 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Nxf2Q4ZGD8 691 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Igbp1Q61249 340 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Lrrc8aQ80WG5 810 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Btn2a2A4QPC6 514 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc148Q6P5U8 527 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc122Q8BVN0 290 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Lonrf3Q9D4H7 753 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Asic1Q6NXK8 526 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cdan1Q8CC12 1239 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Gbp7Q91Z40 638 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Uggt1Q6P5E4 1551 aa10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Iqgap1Q9JKF1 1657 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Erich2E9Q1A6 463 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tshz2Q68FE9 1030 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Snd1Q78PY7 910 aaKnown RBP10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 DlatQ8BMF4 642 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Letm1Q9Z2I0 738 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Exoc5Q3TPX4 708 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Phf23Q8BSN5 401 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Hdac9Q99N13 588 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Krt20Q9D312 431 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Zkscan5Q9Z1D8 819 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Speer3W4VSP1 261 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Hfm1D3Z4R1 1434 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Zfp853A0A1D5RM95 733 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 1700006A11RikB9EHI3 544 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 NpcdF8VQB8 469 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 IntuQ059U7 942 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 ErmnQ5EBJ4 281 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Naa15Q80UM3 865 aaKnown RBP10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Diaph2O70566 1098 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Zc3h12cQ5DTV4 884 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc42Q5SV66 316 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ppp1r14cQ8R4S0 164 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Spata31d1bE9QA57 1361 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Bin2D3Z6Q9 489 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Myl6bQ8CI43 207 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Kcnj14Q8JZN3 434 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tbc1d4Q8BYJ6 1307 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Klhl34A2AI76 644 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Jdp2P97875 163 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Emilin2Q8K482 1074 aa10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Pdcd6ipQ9WU78 869 aaKnown RBP10.36□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tpcn2Q8BWC0 731 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ssx2ipQ8VC66 615 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 St5Q924W7 1134 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Smco2Q9DA21 347 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Elmsan1E9Q2I4 1089 aaKnown RBP10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 PpardP35396 440 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 MarsQ68FL6 902 aaKnown RBP10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Asic3Q6X1Y6 530 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Bmp2kQ91Z96 1138 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Pdzd9Q9D9M4 266 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc97Q9DBT3 340 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Znf287Q9EQB9 759 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Actn3O88990 900 aaKnown RBP10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Atg3Q9CPX6 314 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Mast3Q3U214 1321 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Clasp1Q80TV8 1535 aaKnown RBP10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cnksr1A2A9K7 700 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Speer4f2E9Q366 295 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Eya2O08575 532 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cd22P35329 862 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Spg7Q3ULF4 781 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Arhgef1Q61210 920 aaKnown RBP10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Bend3Q6PAL0 825 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Hs2st1Q8R3H7 356 aa10.35□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Taco1Q8K0Z7 294 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Gm10378F6XQQ1 160 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 ChkbO55229 394 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Hook3Q8BUK6 718 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Kcnk13Q8R1P5 405 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Clic4Q9QYB1 253 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 TsksO54887 585 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 CoilQ5SU73 570 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Rps6ka5Q8C050 863 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 SarnpQ9D1J3 210 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 IkbkgO88522 412 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Samsn1P57725 372 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 GabpaQ00422 454 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Sec62Q8BU14 398 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tubb4aQ9D6F9 444 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ddx24Q9ESV0 857 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Prpf40aQ9R1C7 953 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Uso1Q9Z1Z0 959 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Gm28919A0A087WP35 240 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Smarcc2Q6PDG5 1213 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Dis3l2Q8CI75 870 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Rnf17Q99MV7 1640 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms