RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Rps6ka4Q9Z2B9 773 aa12.36□□□□□ -0.43
Msh3-202ENSMUST00000185852 Arhgap33Q80YF9 1305 aa12.36□□□□□ -0.43
Msh3-202ENSMUST00000185852 Flt4P35917 1363 aa12.36□□□□□ -0.43
Msh3-202ENSMUST00000185852 Cdk5rap2Q8K389 1822 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Pagr1bF6V0H0 108 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Gjc1P28229 396 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Gnat2P50149 354 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Usp50Q6P8X6 390 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Clic6Q8BHB9 596 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Commd10Q8JZY2 202 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Kiaa1024Q8K3V7 917 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Pagr1aQ99L02 253 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Klhl10Q9D5V2 608 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Sept14Q9DA97 430 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Prr29B1ARI9 187 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Lrrc36Q3V0M2 755 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Secisbp2lQ6A098 1086 aaKnown RBP12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Sestd1Q80UK0 696 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Slc13a4Q8BZ82 625 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Baiap2l1Q9DBJ3 514 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Lmbr1Q9JIT0 490 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Sorbs3Q9R1Z8 733 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Ino80Q6ZPV2 1559 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Rsph10bE9PYQ0 876 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Nmt2O70311 529 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Usp25P57080 1055 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Slc39a11Q8BWY7 342 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 McamQ8R2Y2 648 aaKnown RBP12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Pcdhb22Q91XZ8 794 aa12.35□□□□□ -0.43
Msh3-202ENSMUST00000185852 Tom1l2Q5SRX1 507 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Scaf1Q5U4C3 1256 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Ktn1Q61595 1327 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Dnajc25A2ALW5 357 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Mx1P09922 631 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Calm1P0DP26 149 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Calm2P0DP27 149 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Calm3P0DP28 149 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 CebpaP53566 359 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Mtmr3Q8K296 1196 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Ipo7Q9EPL8 1038 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Chaf1aQ9QWF0 911 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Pdcd6ipQ9WU78 869 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Adamts7Q68SA9 1657 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 GakQ99KY4 1305 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Zkscan7E9PVW1 718 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 MarcksP26645 309 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 CebpzP53569 1052 aaKnown RBP12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Gm5592Q3V0A6 857 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Usp33Q8R5K2 909 aa12.34□□□□□ -0.43
Msh3-202ENSMUST00000185852 Trim25Q61510 634 aaKnown RBP12.33□□□□□ -0.43
Msh3-202ENSMUST00000185852 Serpina10Q8R121 448 aa12.33□□□□□ -0.43
Msh3-202ENSMUST00000185852 Tab2Q99K90 693 aa12.33□□□□□ -0.43
Msh3-202ENSMUST00000185852 Kif13aQ9EQW7 1749 aa12.33□□□□□ -0.43
Msh3-202ENSMUST00000185852 Chd4Q6PDQ2 1915 aaKnown RBP12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Odf2A3KGV1 830 aaKnown RBP12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cyp4f39Q8BGU0 532 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 4933402E13RikQ9D4D2 429 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Znf287Q9EQB9 759 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Elmsan1E9Q2I4 1089 aaKnown RBP12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Fdx1P46656 188 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Znf667Q2TL60 609 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 C87499Q3UX49 493 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Atp2b4Q6Q477 1205 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ncaph2Q8BSP2 607 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Tmx3Q8BXZ1 456 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cdan1Q8CC12 1239 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Spire2Q8K1S6 718 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Hdac9Q99N13 588 aa12.33□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cpb1B2RS76 415 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Clrn2B2RVW2 232 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Atp2b1G5E829 1220 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Abcd1P48410 736 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Eya3P97480 510 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Slc38a10Q5I012 1090 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Leo1Q5XJE5 667 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Dpp8Q80YA7 892 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Vwa3bJ9JI28 736 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Lnx1O70263 728 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Tyro3P55144 880 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Pls1Q3V0K9 630 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ube3bQ9ES34 1070 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Setdb1O88974 1307 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Prdm11A2AGX3 565 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Prss40A6H6T1 365 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Plcb3P51432 1234 aaKnown RBP12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Slu7Q8BHJ9 585 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Foxo4Q9WVH3 505 aa12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Usp42B2RQC2 1324 aaKnown RBP12.32□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ccdc174Q3U155 467 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 PsdQ5DTT2 1024 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Bola3Q8CEI1 110 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 AdpgkQ8VDL4 496 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ehd4Q9EQP2 541 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Atp12aQ9Z1W8 1035 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Haus6Q6NV99 933 aaKnown RBP12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ano6Q6P9J9 911 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ccdc172Q810N9 267 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Rasgrp4Q8BTM9 673 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ciao1Q99KN2 339 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Krtap5-3Q9D226 196 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms