RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Kif22Q3V300 660 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Krt74Q6IFZ9 495 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ces1dQ8VCT4 565 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Dpp7Q9ET22 506 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Map7O88735 730 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Stk11ipQ3TAA7 1072 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Klrg2Q3UM83 387 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Psen2Q61144 448 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tm4sf1Q64302 202 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Krt40Q6IFX3 439 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rassf8Q8CJ96 419 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ipo9Q91YE6 1041 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 KnstrnQ9D9Z1 312 aaKnown RBP9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Efcc1Q9JJF6 558 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Epb41l3Q9WV92 929 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ppef1O35655 650 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mcm2P97310 904 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Slc10a5Q5PT54 434 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Lman1lQ8VCD3 505 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Hdac9Q99N13 588 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tnip1Q9WUU8 647 aa9.99□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tmed8Q3UHI4 326 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 AsnsQ61024 561 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Acap3Q6NXL5 833 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mb21d2Q8C525 428 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ferd3lQ923Z4 168 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Slc4a4O88343 1079 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tnni2P13412 182 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Pdia3P27773 505 aaKnown RBP9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Adgre1Q61549 931 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 HelbQ6NVF4 1074 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Olfm5Q8BU90 496 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Igf2bp3Q9CPN8 579 aaKnown RBP9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Sept14Q9DA97 430 aa9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 Polr2aP08775 1970 aaKnown RBP9.98□□□□□ -0.81
Trim39-205ENSMUST00000173369 NyxP83503 476 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Nlgn2Q69ZK9 836 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 LdhdQ7TNG8 484 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 KhnynQ80U38 671 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Sik3Q6P4S6 1311 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Kif20aP97329 887 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Nme8Q715T0 586 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 WdpcpQ8C456 722 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rhot2Q8JZN7 620 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Slc24a3Q99PD7 645 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mlh1Q9JK91 760 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Chd5A2A8L1 1946 aa9.97□□□□□ -0.81
Trim39-205ENSMUST00000173369 Pcdhb9E9Q5G2 828 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Gpatch11Q3UFS4 262 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Fam117aQ7TNF9 451 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Col5a2Q3U962 1497 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Flvcr1B2RXV4 560 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rbm43Q99J64 343 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Dynll2Q9D0M5 89 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Appbp2Q9DAX9 585 aa9.96□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tbc1d4Q8BYJ6 1307 aa9.96□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ttll12Q3UDE2 639 aa9.96□□□□□ -0.82
Trim39-205ENSMUST00000173369 Adck5Q80V03 582 aa9.96□□□□□ -0.82
Trim39-205ENSMUST00000173369 Kbtbd13Q8C828 458 aa9.96□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ndfip2Q91ZP6 311 aa9.96□□□□□ -0.82
Trim39-205ENSMUST00000173369 Myo1bP46735 1107 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 ErmnQ5EBJ4 281 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Jakmip1Q8BVL9 626 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Yipf1Q91VU1 306 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Phlpp2Q8BXA7 1320 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Spata5Q3UMC0 893 aaKnown RBP9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Thrap3Q569Z6 951 aaKnown RBP9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Eme2Q56A04 373 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 AidaQ8C4Q6 305 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Tceanc2Q8R2M0 207 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ppp6r3Q922D4 844 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Borcs6Q9D6W8 360 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Cxcl11Q9JHH5 100 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Txnrd2Q9JLT4 524 aa9.95□□□□□ -0.82
Trim39-205ENSMUST00000173369 Myh3P13541 1940 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 CnpP16330 420 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 LeprP48356 1162 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Rpusd2Q149F1 553 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Aak1Q3UHJ0 959 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Tmem130Q6NXM3 419 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Otop3Q80UF9 577 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Angel2Q8K1C0 544 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 NpcdF8VQB8 469 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Il7P10168 154 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 F2rP30558 430 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Hspd1P63038 573 aaKnown RBP9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Spty2d1Q68FG3 682 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Lrrfip2Q91WK0 415 aa9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ppil4Q9CXG3 492 aaKnown RBP9.94□□□□□ -0.82
Trim39-205ENSMUST00000173369 Prss51A0A286YDY8 319 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Rps12P63323 132 aaKnown RBP9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Liat1Q810M6 228 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Erc1Q99MI1 1120 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 CsadQ9DBE0 493 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ddx20Q9JJY4 825 aaKnown RBP9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 NynrinQ5DTZ0 1840 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Myh13B1AR69 1938 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Gm36210A0A1B0GS00 229 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Ppfia1B2RXQ2 1266 aa9.93□□□□□ -0.82
Trim39-205ENSMUST00000173369 Prl7a2O54831 253 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms