RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Cpb1B2RS76 415 aa17.74■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Atp6v1aP50516 617 aaKnown RBP17.74■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Kifap3P70188 793 aa17.74■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Atp7aQ64430 1491 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Oxr1Q4KMM3 866 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Adam1aQ60813 791 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Vps52Q8C754 723 aaKnown RBP17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Prex2Q3LAC4 1598 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 CltaO08585 235 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Traf3ip3Q8C0G2 513 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Galnt15Q9D2N8 638 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Trpc3Q9QZC1 836 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Kif5cP28738 956 aaKnown RBP17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Bnip3lQ9Z2F7 218 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Tdo2P48776 406 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 SnrkQ8VDU5 748 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Pde6cQ91ZQ1 861 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Stoml1Q8CI66 399 aa17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Scyl1Q9EQC5 806 aaKnown RBP17.73■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Gm1993A6X8I0 212 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 SlxD3Z347 212 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Dnajc5bQ9CQ94 199 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Six6os1Q9CTN5 574 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 ZfxP17012 799 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Eps15P42567 897 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Kank4Q6P9J5 1016 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Ifih1Q8R5F7 1025 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Kif17Q99PW8 1038 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Clul1Q3ZRW6 464 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Plcd3Q8K2J0 785 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 IqcdQ9D3V1 458 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Rrp1P56183 494 aaKnown RBP17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Nek11Q8C0Q4 628 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Armc9Q9D2I5 817 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Ankrd24Q80VM7 985 aa17.72■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Grin2aP35436 1464 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Uspl1Q3ULM6 1089 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Zkscan4Q5SZT6 480 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Mcur1Q9CXD6 340 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Hmgb1P63158 215 aaKnown RBP17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Fmnl3Q6ZPF4 1028 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Dhx38Q80X98 1228 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Prl7a2O54831 253 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Frat1P70339 274 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Zbtb16Q3UQ17 673 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Esco1Q69Z69 843 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Rps6kb1Q8BSK8 525 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Mast3Q3U214 1321 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Kdm5bQ80Y84 1544 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Cops6O88545 324 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Dok7Q18PE0 504 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Hexim1Q8R409 356 aaKnown RBP17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Cers3Q1A3B0 383 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 Top2bQ64511 1612 aa17.71■□□□□ 0.43
Gtf3c4-204ENSMUST00000171404 LifrP42703 1092 aa17.71■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Efhd1Q9D4J1 240 aa17.71■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Tor4aQ8BH02 426 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Miga2Q8BK03 593 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Nxf1Q99JX7 618 aaKnown RBP17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Apol10bG3X9K7 334 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 MybP06876 636 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Taf7lQ9D3R9 471 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Zfp397Q7TNK4 527 aa17.7■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 U2af2P26369 475 aaKnown RBP17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Trerf1Q8BXJ2 1205 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Snapc4Q8BP86 1333 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Arhgef2Q60875 985 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 HarsQ61035 509 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 ThemisQ8BGW0 636 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Klhl7Q8BUL5 586 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Aifm3Q3TY86 605 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Cst12Q9DAN8 128 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Stmn2P55821 179 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Ddx17Q501J6 650 aaKnown RBP17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Slc38a10Q5I012 1090 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Gpbp1Q6NXH3 473 aaKnown RBP17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Acsl3Q9CZW4 720 aaKnown RBP17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Eno4Q8C042 619 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Bicdl2Q8CHW5 507 aa17.69■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Sh2d4bA6X942 431 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Cct6bQ61390 531 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 BrapQ99MP8 591 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 BC005561E9Q5E2 1589 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 A0A1W2P7S8 802 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 FanccP50652 591 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Cdc5lQ6A068 802 aaKnown RBP17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Skap1Q3UUV5 355 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Fyb2A2A995 729 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Gm29094F6Q785 221 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Rpl13P47963 211 aaKnown RBP17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Rsad2Q8CBB9 362 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Rmi1Q9D4G9 616 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Dnajb7Q9QYI8 312 aa17.68■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Zkscan16A2ALW2 728 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Esyt2Q3TZZ7 845 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Znf467Q8JZL0 594 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Adcy3Q8VHH7 1145 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Mlh3A0A1Y7VMP7 1443 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Elf1Q60775 612 aa17.67■□□□□ 0.42
Gtf3c4-204ENSMUST00000171404 Kcnj14Q8JZN3 434 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms