RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 F2rP30558 430 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 LmnaP48678 665 aaKnown RBP11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Frat1P70339 274 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Fhod1Q6P9Q4 1197 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Smarcc2Q6PDG5 1213 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Tsr2Q8C8T8 191 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Kctd15Q8K0E1 283 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Tmem119Q8R138 280 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Tcf25Q8R3L2 676 aaKnown RBP11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Pcdhgc3Q91XX1 934 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 HnrnpmQ9D0E1 729 aaKnown RBP11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Lgr5Q9Z1P4 907 aa11.91□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Ltbp4Q8K4G1 1666 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Col1a2Q01149 1372 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Wdr17E9Q271 1322 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Ugt1a5B2RT14 529 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Kif3cO35066 796 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Mphosph10Q810V0 681 aaKnown RBP11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Gpatch3Q8BIY1 525 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Ift57Q8BXG3 429 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Q8BZJ8 459 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Zfp317Q8C0Q5 607 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Spata32Q8C5V0 334 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Iffo2Q8R2V2 512 aa11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 AatfQ9JKX4 526 aaKnown RBP11.9□□□□□ -0.5
Pdlim5-204ENSMUST00000168967 Kdm6aO70546 1401 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Flt4P35917 1363 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ktn1Q61595 1327 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Mtx1P47802 317 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Vgll3P85442 326 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ap5z1Q3U829 807 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Tgfb1i1Q62219 461 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Dhx40Q6PE54 779 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Larp1Q6ZQ58 1072 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 SympkQ80X82 1284 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Znf467Q8JZL0 594 aa11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 StrbpQ91WM1 672 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Telo2Q9DC40 840 aaKnown RBP11.9□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 D430041D05RikF6ZGR6 1678 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Tcof1O08784 1320 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Exoc6bA6H5Z3 810 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 H2afxP27661 143 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ubash3aQ3V3E1 624 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Usp28Q5I043 1051 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Zbtb42Q811H0 420 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 GphnQ8BUV3 769 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Nek11Q8C0Q4 628 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ankrd1Q9CR42 319 aa11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Mrpl44Q9CY73 333 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Gm21190A0A0G2JGJ6 266 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Pou3f3P31361 497 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Kcnj4P52189 445 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Morc2aQ69ZX6 1030 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Srek1Q8BZX4 494 aaKnown RBP11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Gatad2bQ8VHR5 594 aaKnown RBP11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Pcdhgc5Q91XW9 944 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Snw1Q9CSN1 536 aaKnown RBP11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Mxra7Q9CZH7 178 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Nid2O88322 1403 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ric1Q69ZJ7 1422 aa11.88□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Calcoco2A2A6M5 331 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Tnnt1O88346 262 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Dnajc2P54103 621 aaKnown RBP11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Anp32eP97822 260 aaKnown RBP11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ctdnep1Q3TP92 244 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Ints6lQ8BND4 861 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Sox30Q8CGW4 782 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Slc26a8Q8R0C3 999 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Naa16Q9DBB4 864 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Col4a3bpQ9EQG9 624 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 C3P01027 1663 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Als2Q920R0 1651 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Rimbp3Q3V0F0 1606 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Cfap70D3YVL2 1141 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Lnx1O70263 728 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 KitP05532 979 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Grm8P47743 908 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Map3k2Q61083 619 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Mns1Q61884 491 aa11.87□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Aox2Q5SGK3 1345 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 IghaA0A0A6YXW6 389 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Znf568E9PYI1 671 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Phf20l1Q8CCJ9 1013 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Trim59Q922Y2 403 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 BrapQ99MP8 591 aa11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Bicc1Q99MQ1 977 aaKnown RBP11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Mrvi1Q9WUX5 899 aaKnown RBP11.86□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Irgm2A0A140LIF8 407 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Serpinb6bO08804 377 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Pa2g4P50580 394 aaKnown RBP11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Irf9Q61179 399 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Btbd11Q6GQW0 1109 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Tpm4Q6IRU2 248 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Trak2Q6P9N8 913 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Usp44Q8C2S0 711 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Desi1Q9CQT7 168 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Kif12Q9D2Z8 642 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Il1rapl2Q9ERS6 686 aa11.85□□□□□ -0.51
Pdlim5-204ENSMUST00000168967 Wdr19Q3UGF1 1341 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 80.9 ms