RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Pde6aP27664 859 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Q8CEZ4 452 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Nek9Q8K1R7 984 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Desi2Q9D291 194 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Thsd7aQ69ZU6 1645 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Pcdhb9E9Q5G2 828 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Cplx2P84086 134 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Q66JV7 365 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Vps37dQ810I0 261 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Kcnj14Q8JZN3 434 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Pcdhb22Q91XZ8 794 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Atp8b5A3FIN4 1183 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Rtel1Q0VGM9 1203 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Sox30Q8CGW4 782 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Tgs1Q923W1 853 aa19.99■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Cyp3a59D3Z2W7 503 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Arhgef16Q3U5C8 713 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Fez2Q6TYB5 348 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Fam160b2Q80YR2 744 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Anp32eP97822 260 aaKnown RBP19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Cdkl5Q3UTQ8 938 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Nlrp9aQ66X03 949 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Phf20l1Q8CCJ9 1013 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Lonp2Q9DBN5 852 aa19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 AatfQ9JKX4 526 aaKnown RBP19.98■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Eif5P59325 429 aaKnown RBP19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gabpb2P81069 414 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Specc1lQ2KN98 1118 aaKnown RBP19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Zbtb38Q3LR78 1197 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Tpm4Q6IRU2 248 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Luc7l2Q7TNC4 392 aaKnown RBP19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 IqcgQ80W32 419 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 9230110C19RikQ8CC70 267 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Brd3Q8K2F0 726 aaKnown RBP19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Tada3Q8R0L9 432 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Nek3Q9R0A5 511 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 EmbP21995 330 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ovgp1Q62010 721 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Tcp11l1Q8BTG3 509 aa19.97■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Cep63Q3UPP8 700 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ift122Q6NWV3 1182 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Zmynd15Q8C0R7 736 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Eaf2Q91ZD6 262 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Polr2dQ9D7M8 142 aaKnown RBP19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 PsdQ5DTT2 1024 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ncoa7Q6DFV7 943 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Clca2Q8BG22 942 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ccdc47Q9D024 483 aaKnown RBP19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Txnrd1Q9JMH6 613 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 FocadA2AKG8 1798 aa19.96■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Dhx8A2A4P0 1244 aaKnown RBP19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Atf3Q60765 181 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Necab1Q8BG18 352 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Baiap2l1Q9DBJ3 514 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Naaladl2A0A0N4SUJ3 795 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 PnnO35691 725 aaKnown RBP19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Pla2g4bP0C871 782 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Pla2g4fQ50L41 855 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Gm12185Q5NCB2 835 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Sptlc3Q8BG54 563 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Ccdc150Q8CDI7 1110 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Vps16Q920Q4 839 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 NenfQ9CQ45 171 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Cap2Q9CYT6 476 aa19.95■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Gtf2f1Q3THK3 508 aaKnown RBP19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Pex1Q5BL07 1284 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Mkrn3Q60764 544 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Lamb3Q61087 1168 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Clic6Q8BHB9 596 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 BaatQ91X34 420 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Pcdhgc5Q91XW9 944 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Mrc1Q61830 1456 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Col3a1P08121 1464 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Hap1O35668 628 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Cyp19a1P28649 503 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Suclg2Q9Z2I8 433 aa19.94■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Asnsd1Q8BFS9 627 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Ankk1Q8BZ25 745 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Trim11Q99PQ2 467 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Tubb4aQ9D6F9 444 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Zranb2Q9R020 330 aaKnown RBP19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Abca15E9PWH4 1668 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Agtpbp1Q641K1 1218 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Usp49Q6P9L4 685 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 AbraQ8BUZ1 375 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Alx1Q8C8B0 326 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Ces1dQ8VCT4 565 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Krt84Q99M73 603 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Cbx6Q9DBY5 414 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Bcl9Q9D219 1425 aa19.93■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Hspa4Q61316 841 aa19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Glis3Q6XP49 780 aa19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Btn2a2A4QPC6 514 aa19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Sdc2P43407 202 aa19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Myo1bP46735 1107 aa19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Smg7Q5RJH6 1138 aaKnown RBP19.92■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Capn2O08529 700 aa19.91■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Psmb7P70195 277 aa19.91■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Atp8a2P98200 1148 aa19.91■□□□□ 0.78
Ckap4-202ENSMUST00000167671 Washc4Q3UMB9 1173 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms