RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ddb1Q3U1J4 1140 aaKnown RBP17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Map3k9Q3U1V8 1077 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 SlmapQ3URD3 845 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Gli2Q0VGT2 1544 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Znf335A2A5K6 1337 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Slc27a3O88561 667 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Mybl2P48972 704 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 SbdsP70122 250 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Tex35Q14BK3 207 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Snx25Q3ZT31 840 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Fam204aQ8C6C7 236 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 Golga5Q9QYE6 729 aa17.4■□□□□ 0.38
Pcdha9-201ENSMUST00000115659 CrklP47941 303 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 JmyQ9QXM1 983 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Lekr1B2RVN1 116 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gm2030D3Z7C4 212 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Eef2P58252 858 aaKnown RBP17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Usp11Q99K46 921 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Sept7O55131 436 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc57Q6PHN1 1016 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Cfap57Q9D180 1249 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ranbp1P34022 203 aaKnown RBP17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 PpardP35396 440 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Arhgef2Q60875 985 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Cadps2Q8BYR5 1297 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Klhl20Q8VCK5 604 aa17.39■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Snapc4Q8BP86 1333 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 AnkarA2RT91 1465 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gm30191A0A0U1RNT7 187 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Dnajc21E9Q8D0 531 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 MthfslL7N466 203 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Smarcad1Q04692 1021 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Pank2Q3U4S0 443 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 ParnQ8VDG3 624 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gbp7Q91Z40 638 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 VimP20152 466 aaKnown RBP17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rapgef1Q3UHC1 1224 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Xpo4Q9ESJ0 1151 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Lztfl1Q9JHQ5 299 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Noc2lQ9WV70 747 aaKnown RBP17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Plxnc1Q9QZC2 1574 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Bpifb4A2BGH0 617 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Cetn3O35648 167 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Chmp6P0C0A3 200 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc129Q14B48 1034 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rab3gap1Q80UJ7 981 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Stoml1Q8CI66 399 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Kifap3P70188 793 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Lzts2Q91YU6 671 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 PpanQ91YU8 470 aaKnown RBP17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 NapaQ9DB05 295 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Naa16Q9DBB4 864 aa17.38■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Tom1O88746 492 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Atp6v0a2P15920 856 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Aimp1P31230 310 aaKnown RBP17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Bach2P97303 839 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Kiaa1328Q6NZK5 612 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Sgsm2Q80U12 1005 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Nlgn1Q99K10 843 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Fam114a1Q9D281 569 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Cib2Q9Z309 187 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 AatkQ80YE4 1365 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Scaf11E9PZM7 1456 aaKnown RBP17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Krt18P05784 423 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Krt13P08730 437 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 ErmnQ5EBJ4 281 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Zscan22Q8BGS5 496 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Phkg2Q9DB30 406 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Pdcd6ipQ9WU78 869 aaKnown RBP17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 PzpQ61838 1495 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 PcQ05920 1178 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Dcaf17Q3TUL7 519 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Efcab6Q6P1E8 1516 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 PsdQ5DTT2 1024 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Prdm1Q60636 856 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Jarid2Q62315 1234 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 AdpgkQ8VDL4 496 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Pcdhb5Q91XZ5 792 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ndufab1Q9CR21 156 aa17.37■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc152E9PX14 254 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rsph10bE9PYQ0 876 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Prl7a2O54831 253 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Nlrp9aQ66X03 949 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Esco1Q69Z69 843 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Trim6Q8BGE7 488 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Fsip1Q9D3V5 435 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Nlrp1aQ2LKU9 1182 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Atp1a2Q6PIE5 1020 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Plekhg2Q6KAU7 1340 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Samd15F6XZJ7 620 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Parp1P11103 1013 aaKnown RBP17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Asic2Q925H0 512 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Paip2Q9D6V8 124 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 LratQ9JI60 231 aa17.36■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Gm12185Q5NCB2 835 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Ccdc28aQ8CEI3 192 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Emilin2Q8K482 1074 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Rab3il1Q8VDV3 383 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 EmbP21995 330 aa17.35■□□□□ 0.37
Pcdha9-201ENSMUST00000115659 Map3k7clP58500 142 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms