RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Ubxn10Q8BG34 277 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Mical1Q8VDP3 1048 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Cfap45Q9D9U9 551 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Gm1979E9QAN3 267 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Sem1P60897 70 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Mum1l1Q4VA55 681 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ankrd40Q5SUE8 363 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ccdc148Q6P5U8 527 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Kif2bQ8C0N1 668 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Calr3Q9D9Q6 380 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Lztfl1Q9JHQ5 299 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Adcy9P51830 1353 aa8.48□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Proca1B0QZF7 307 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Gm10563F6WIE4 79 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ap1g2O88512 791 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ddr1Q03146 911 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ctdnep1Q3TP92 244 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Fbxw10Q5SUS0 1030 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Agtpbp1Q641K1 1218 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ankrd24Q80VM7 985 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Dennd6aQ8BH65 605 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Hps6Q8BLY7 805 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Slc26a8Q8R0C3 999 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Taf5lQ91WQ5 589 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Gm5624F6ZZG8 207 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 PrphP15331 475 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Nbr1P97432 988 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Hdgfl1Q2VPR5 283 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Gm28047Q3US59 414 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Sycp1Q62209 993 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Cplx4Q80WM3 160 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 AdarQ99MU3 1178 aaKnown RBP8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Tet3Q8BG87 1668 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 PzpQ61838 1495 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Dapk3O54784 448 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Arhgap6O54834 987 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Wee1P47810 646 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Mphosph10Q810V0 681 aaKnown RBP8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ccdc150Q8CDI7 1110 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 PigoQ9JJI6 1093 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Acot9Q9R0X4 439 aaKnown RBP8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Sept3Q9Z1S5 350 aa8.47□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Nwd1A6H603 1563 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Cacna2d1O08532 1103 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Snap23O09044 210 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Zfpm1O35615 995 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 NntQ61941 1086 aaKnown RBP8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Ovgp1Q62010 721 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 TrhQ62361 256 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Luc7l2Q7TNC4 392 aaKnown RBP8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Rbbp5Q8BX09 538 aaKnown RBP8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Filip1Q9CS72 1211 aa8.46□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Nckap5lQ6GQX2 1323 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Dctn1O08788 1281 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Pafah1b1P63005 410 aaKnown RBP8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ift88Q61371 824 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 HrQ61645 1182 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gm21985Q6P6P5 1106 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Naif1Q6PFD7 327 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ctdp1Q7TSG2 960 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Chmp3Q9CQ10 224 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 CenphQ9QYM8 241 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Vstm4T1NXB5 319 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Disp3A3KFU9 1347 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Arfgef2A2A5R2 1792 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Psmd1Q3TXS7 953 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Sco1Q5SUC9 284 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cct6bQ61390 531 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Nek11Q8C0Q4 628 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Terf2ipQ91VL8 393 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Syf2Q9D198 242 aaKnown RBP8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Egfl6Q9JJZ5 550 aa8.46□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Igsf1Q7TQA1 1317 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Zc3h13E9Q784 1729 aaKnown RBP8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Abcd1P48410 736 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Opa1P58281 960 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Kdm7aQ3UWM4 940 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Krt39Q6IFX4 482 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cep85lA0A1W2P884 806 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 CltaO08585 235 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 PsapQ61207 557 aaKnown RBP8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Klra3Q64329 266 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 U2af1l4Q8BGJ9 220 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Efcab14Q8BGQ6 484 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 SncbQ91ZZ3 133 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 ToporslQ9D2F8 683 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Abcc12Q80WJ6 1366 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Chd2E9PZM4 1827 aaKnown RBP8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gm28510A0A087WP28 240 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cyp26c1B2RXA7 518 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Traf1P39428 409 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gucy2cQ3UWA6 1072 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gbp4Q61107 620 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Tsga10Q6NY15 697 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 RictorQ6QI06 1708 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 B4galnt4Q766D5 1034 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Necab1Q8BG18 352 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Acbd3Q8BMP6 525 aa8.45□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Iffo1Q8BXL9 562 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms