RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Slfn1Q9Z0I7 337 aa11.99□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Myl3P09542 204 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Pde11aP0C1Q2 933 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Znf667Q2TL60 609 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Rbm15bQ6PHZ5 887 aaKnown RBP11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gpr108Q91WD0 569 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Myl10Q62082 202 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Necab1Q8BG18 352 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Plcd1Q8R3B1 756 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Hs2st1Q8R3H7 356 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Brms1Q99N20 246 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Sptlc2P97363 560 aaKnown RBP11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Znf653Q6YND2 615 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Rbm19Q8R3C6 952 aaKnown RBP11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Hps4Q99KG7 671 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Zbtb7aO88939 569 aaKnown RBP11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 March6Q6ZQ89 909 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 IqcgQ80W32 419 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tmx3Q8BXZ1 456 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Usp44Q8C2S0 711 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Stn1Q8K2X3 378 aa11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Gtf2iQ9ESZ8 998 aaKnown RBP11.98□□□□□ -0.49
Ldb3-205ENSMUST00000090040 AsnsQ61024 561 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Slfnl1Q8BHW9 410 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Carmil3Q3UFQ8 1375 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Cd3dP04235 173 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Lrrfip1Q3UZ39 729 aaKnown RBP11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ercc6lQ8BHK9 1240 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 SltmQ8CH25 1031 aaKnown RBP11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Stim1P70302 685 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tbc1d2bQ3U0J8 965 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 PtprvP70289 1705 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Stx1aO35526 288 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ubash3aQ3V3E1 624 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Krt40Q6IFX3 439 aa11.97□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Znhit6Q3UFB2 460 aaKnown RBP11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Il17raQ60943 864 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Ddx31Q6NZQ2 687 aaKnown RBP11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Acnat2Q8BGG9 420 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Arhgef6Q8K4I3 771 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 SdsQ8VBT2 327 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Popdc2Q9ES82 367 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Nap1l5Q9JJF0 156 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tet3Q8BG87 1668 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Atp6v0a2P15920 856 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Celf1P28659 486 aaKnown RBP11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Fam83bQ0VBM2 1012 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 VrtnQ3SYK4 740 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tmem179Q8BHH9 233 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Me3Q8BMF3 604 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Akt1s1Q9D1F4 257 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Tktl2Q9D4D4 627 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Rnf123Q5XPI3 1314 aa11.96□□□□□ -0.49
Ldb3-205ENSMUST00000090040 Wdr78E9PYY5 807 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Dapk3O54784 448 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Gm28047Q3US59 414 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Tmod2Q9JKK7 351 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Gcom1E9PZ54 550 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Cyp26a1O55127 497 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 LdhaP06151 332 aaKnown RBP11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Mybl2P48972 704 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 MyzapQ3UIJ9 466 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Ankrd1Q9CR42 319 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Ndufa8Q9DCJ5 172 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Tbc1d8Q9Z1A9 1134 aa11.96□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Gm20425E9Q035 978 aaKnown RBP11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 4930523C07RikE9Q2T4 99 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 SrprbP47758 269 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Foxp1P58462 705 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Ranbp6Q8BIV3 1105 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Bola3Q8CEI1 110 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 IcoslgQ9JHJ8 322 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Ltbp4Q8K4G1 1666 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Eif5P59325 429 aaKnown RBP11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Spata18Q0P557 537 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Map3k12Q60700 888 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Rcan3Q9JKK0 239 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Homer1Q9Z2Y3 366 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Elmsan1E9Q2I4 1089 aaKnown RBP11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Lipo1J3QME6 396 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Prpf38aQ4FK66 312 aaKnown RBP11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Zkscan7E9PVW1 718 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Tango6Q8C3S2 1079 aa11.95□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Pip4k2aO70172 405 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Lrrc2Q8VDB8 371 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Pald1P70261 859 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Tex2Q6ZPJ0 1128 aaKnown RBP11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Cul5Q9D5V5 780 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Cfap45Q9D9U9 551 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Vmn2r68L7N2B3 851 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 MarcksP26645 309 aaKnown RBP11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 MycbpapQ5SUV2 932 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Znf496Q5SXI5 585 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Mrpl50Q8VDT9 159 aaKnown RBP11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Lzts2Q91YU6 671 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Rbm6S4R1W5 1118 aaKnown RBP11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Cep120Q7TSG1 988 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Map10Q8BJS7 891 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Q8C6G1 249 aa11.94□□□□□ -0.5
Ldb3-205ENSMUST00000090040 Luzp1Q8R4U7 1068 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms