RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Pprc1Q6NZN1 1644 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccdc121E9Q6D3 323 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Gtpbp6Q3U6U5 514 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 InhbeO08717 350 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccdc162pQ0VG85 912 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccpg1Q640L3 753 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Asic3Q6X1Y6 530 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Maip1Q8BHE8 291 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Rab3il1Q8VDV3 383 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Bbs5Q9CZQ9 341 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Rrbp1Q99PL5 1605 aaKnown RBP13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Gm45015A0A140LII9 184 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Mdh1bQ5F204 500 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ctnna3Q65CL1 895 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 HmcesQ8R1M0 353 aaKnown RBP13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Lrrc59Q922Q8 307 aaKnown RBP13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Fsip1Q9D3V5 435 aa13.61□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ddx17Q501J6 650 aaKnown RBP13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ccdc148Q6P5U8 527 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Sec62Q8BU14 398 aaKnown RBP13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tmx3Q8BXZ1 456 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Gm5934D3Z4U6 212 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Prl3d1P18121 224 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Zbtb38Q3LR78 1197 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Dcaf17Q3TUL7 519 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Lrrc36Q3V0M2 755 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Acot11Q8VHQ9 594 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Abcc4E9Q236 1325 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pbrm1Q8BSQ9 1634 aaKnown RBP13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 ClasrpQ8CFC7 668 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ubxn1Q922Y1 297 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ivns1abpQ920Q8 642 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Aox1O54754 1333 aa13.6□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Uggt2E9Q4X2 1504 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tubb5P99024 444 aaKnown RBP13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Znf667Q2TL60 609 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ubash3aQ3V3E1 624 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Dhx38Q80X98 1228 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Dpp7Q9ET22 506 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Atp12aQ9Z1W8 1035 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Syde2E9PUP1 1314 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 PparaP23204 468 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Plbd2Q3TCN2 594 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Csrnp2Q8BGQ2 534 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Kcnh3Q9WVJ0 1095 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Fam208aQ69ZR9 1610 aaKnown RBP13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Rapgef1Q3UHC1 1224 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Riox2Q8CD15 465 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ubac1Q8VDI7 409 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ddx27Q921N6 760 aaKnown RBP13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Adgrl3Q80TS3 1537 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ets1P27577 440 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Kifap3P70188 793 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 EspnlQ3UYR4 1005 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Plcd1Q8R3B1 756 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Kdm4cQ8VCD7 1054 aa13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Zcrb1Q9CZ96 217 aaKnown RBP13.59□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Ddx23D3Z0M9 819 aaKnown RBP13.58□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Speer4f2E9Q366 295 aa13.58□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Nlrp1aQ2LKU9 1182 aa13.58□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Taf12Q8VE65 161 aa13.58□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Tnpo2Q99LG2 887 aaKnown RBP13.58□□□□□ -0.23
Col8a1-201ENSMUST00000089332 Pus7B7ZNL8 666 aaKnown RBP13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Rps8P62242 208 aaKnown RBP13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Tbc1d8Q9Z1A9 1134 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 AceP09470 1312 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Mcm6P97311 821 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 PcQ05920 1178 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Sdccag8Q80UF4 717 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Prune1Q8BIW1 454 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Pde5aQ8CG03 865 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Mcur1Q9CXD6 340 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Psrc1Q9D0P7 329 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Ccnt1Q9QWV9 724 aaKnown RBP13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Erbb4Q61527 1308 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Plxnc1Q9QZC2 1574 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 1700006A11RikB9EHI3 544 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Clec11aO88200 328 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Anxa1P10107 346 aaKnown RBP13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Capza3P70190 299 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Fam107bQ3TGF2 131 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Myl10Q62082 202 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Galnt17Q7TT15 598 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Rexo1Q7TT28 1213 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Mettl5Q8K1A0 209 aa13.58□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Cetn3O35648 167 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Ftl2P49945 183 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Adora1Q60612 326 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Sos2Q02384 1333 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 PpardP35396 440 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Gm5935Q497S0 212 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Ncoa4Q5U4H9 625 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Eif4g3Q80XI3 1579 aaKnown RBP13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Sept7O55131 436 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Atp2a2O55143 1044 aaKnown RBP13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Nlrx1Q3TL44 975 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Pdrg1P59048 133 aa13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Gigyf2Q6Y7W8 1291 aaKnown RBP13.57□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Kif2cQ922S8 721 aa13.56□□□□□ -0.24
Col8a1-201ENSMUST00000089332 Riok3Q9DBU3 519 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms