RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Irf5P56477 497 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Cct2P80314 535 aaKnown RBP8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Cnnm2Q3TWN3 875 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Cep63Q3UPP8 700 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Gm5592Q3V0A6 857 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Anp32cQ64G17 123 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Acap3Q6NXL5 833 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Tbc1d31Q6NXY1 996 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Gpr108Q91WD0 569 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Eaf2Q91ZD6 262 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 St5Q924W7 1134 aa8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Mrpl44Q9CY73 333 aaKnown RBP8.84□□□□□ -0.99
Trim40-201ENSMUST00000087158 Myh13B1AR69 1938 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Ube2hP62257 183 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Nap1l3Q794H2 544 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Ano1Q8BHY3 960 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc178Q8CDV0 866 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Trim59Q922Y2 403 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 UvssaQ9D479 717 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Igbp1bQ9QZ29 343 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 VirmaA2AIV2 1811 aaKnown RBP8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Prdm11A2AGX3 565 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Dennd3A2RT67 1274 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Vmn2r23E9PXI5 849 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Mapkapk5O54992 473 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Bend4P86174 541 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc174Q3U155 467 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Spg7Q3ULF4 781 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Slc44a1Q6X893 653 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Tmem59lQ7TNI2 337 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Nxf7Q80SZ6 620 aaKnown RBP8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Cfap69Q8BH53 942 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Sgip1Q8VD37 806 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Slc24a3Q99PD7 645 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Pold4Q9CWP8 107 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Mrpl12Q9DB15 201 aaKnown RBP8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Letm1Q9Z2I0 738 aa8.83□□□□□ -1
Trim40-201ENSMUST00000087158 Ltn1Q6A009 1767 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Lekr1B2RVN1 116 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 NcapgE9PWG6 1004 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Lipo1J3QME6 396 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Cd3dP04235 173 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Slurp2P0DP59 97 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 NfixP70257 488 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Psd3Q2PFD7 1037 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Fam198bQ3UPI1 517 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Zbtb7bQ64321 544 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Igsf3Q6ZQA6 1194 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 R3hcc1Q8BSI6 488 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Rps6ka5Q8C050 863 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 CpzQ8R4V4 654 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Aox3G3X982 1335 aa8.82□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc173A0JLY1 547 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Rgs9O54828 675 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Atp6v0a2P15920 856 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Pde6aP27664 859 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Jdp2P97875 163 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Esyt1Q3U7R1 1092 aaKnown RBP8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Babam1Q3UI43 333 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Rnf41Q8BH75 317 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Tpcn2Q8BWC0 731 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Srgap1Q91Z69 1062 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Pla2g12bQ99P27 195 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc47Q9D024 483 aaKnown RBP8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Stag1Q9D3E6 1258 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Sil1Q9EPK6 465 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Apba2P98084 750 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 PcQ05920 1178 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Cnnm3Q32NY4 713 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Q3TYL0 343 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Ell2Q3UKU1 639 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Kif22Q3V300 660 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 1810065E05RikQ5NC41 235 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Med4Q9CQA5 270 aa8.81□□□□□ -1
Trim40-201ENSMUST00000087158 Ambra1A2AH22 1300 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Sall1Q9ER74 1322 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Fam184aE9PW83 1143 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Wdhd1P59328 1117 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 LyarQ08288 388 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Ccdc51Q3URS9 406 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Prdm1Q60636 856 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Ezh2Q61188 746 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Olfr118Q7TRJ6 321 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 VmacQ8BP01 174 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Zfp317Q8C0Q5 607 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Alg3Q8K2A8 438 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Paf1Q8K2T8 535 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Chd1lQ9CXF7 900 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 RarsQ9D0I9 660 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Rcan1Q9JHG6 198 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Krt85Q9Z2T6 507 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Pnpla6Q3TRM4 1355 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Wdr78E9PYY5 807 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Gm20425E9Q035 978 aaKnown RBP8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Cyp26a1O55127 497 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Me1P06801 572 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Pde11aP0C1Q2 933 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Cd22P35329 862 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 SrprbP47758 269 aa8.8□□□□□ -1
Trim40-201ENSMUST00000087158 Fam83bQ0VBM2 1012 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms