RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Q8CEZ4 452 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Kcnq3Q8K3F6 873 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tnip1Q9WUU8 647 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Eva1cP58659 440 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Kctd16Q5DTY9 427 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Prkab2Q6PAM0 271 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Zfp113Q8C689 439 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Pfkfb1P70266 471 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tacc1Q6Y685 774 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 LarsQ8BMJ2 1178 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Egfl6Q9JJZ5 550 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tmem2Q5FWI3 1383 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm29094F6Q785 221 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Dctn1O08788 1281 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Eftud2O08810 971 aaKnown RBP12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 GnpatP98192 678 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tex35Q14BK3 207 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 9230110C19RikQ8CC70 267 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Usp33Q8R5K2 909 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 SncbQ91ZZ3 133 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 MthfsQ9D110 203 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Trap1aP19473 224 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ighmbp2P40694 993 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Asic3Q6X1Y6 530 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Zfp317Q8C0Q5 607 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Slain2Q8CI08 581 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Krt84Q99M73 603 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ccdc105Q9D4K7 499 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Echdc1Q9D9V3 322 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Mdc1Q5PSV9 1707 aa12.11□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Col16a1Q8BLX7 1580 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Islr2Q5RKR3 745 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Adora1Q60612 326 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Pram1Q6BCL1 675 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ccdc25Q78PG9 208 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Nlgn1Q99K10 843 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tpcn1Q9EQJ0 817 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Arhgef1Q61210 920 aaKnown RBP12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Jade3Q6IE82 823 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Sec62Q8BU14 398 aaKnown RBP12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Adcy3Q8VHH7 1145 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Dnajc17Q91WT4 303 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Kcnh3Q9WVJ0 1095 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Uhrf1bp1B2KF50 1429 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm28510A0A087WP28 240 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Rrp1P56183 494 aaKnown RBP12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gsdma2Q32M21 443 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 TchpQ3TVW5 497 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gtpbp6Q3U6U5 514 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ell2Q3UKU1 639 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Smg7Q5RJH6 1138 aaKnown RBP12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 HhatQ8BMT9 499 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Pwp2Q8BU03 919 aaKnown RBP12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Rapgef3Q8VCC8 918 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 MycbpQ9EQS3 103 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tfcp2Q9ERA0 502 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Capn15Q9JLG8 1095 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Pik3c2aQ61194 1686 aa12.1□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Nck2O55033 380 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Mnat1P51949 309 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cdkl5Q3UTQ8 938 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cc2d1bQ8BRN9 848 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 ImmtQ8CAQ8 757 aaKnown RBP12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Usp27Q8CEG8 438 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gimap6Q8K349 305 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Stk11Q9WTK7 436 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Bicdl1A0JNT9 577 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 C87499Q3UX49 493 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cdca8Q8BHX3 289 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 PdhbQ9D051 359 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 EcsitQ9QZH6 435 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Homer1Q9Z2Y3 366 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Dnajc21E9Q8D0 531 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 EmbP21995 330 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Stim1P70302 685 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cavin2Q63918 418 aaKnown RBP12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Lman1Q9D0F3 517 aa12.09□□□□□ -0.47
Rnf40-201ENSMUST00000033088 ErmardE9Q048 622 aa12.08□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Yipf3Q3UDR8 347 aa12.08□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Dusp10Q9ESS0 483 aa12.08□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm21698A0A087WQP8 267 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Fbf1A2A870 1173 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 1700006A11RikB9EHI3 544 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Bin2D3Z6Q9 489 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 PpardP35396 440 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 MycbpapQ5SUV2 932 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Tsga10Q6NY15 697 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 GckrQ91X44 587 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Q9D5Q8 446 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Irx5Q9JKQ4 484 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Hmg20bQ9Z104 317 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Map2k1P31938 393 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ggt6Q6PDE7 497 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Krit1Q6S5J6 736 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Erlin2Q8BFZ9 340 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 ClasrpQ8CFC7 668 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Srgap2Q91Z67 1071 aa12.08□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Spocd1B1ASB6 936 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Chl1P70232 1209 aa12.07□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Nek11Q8C0Q4 628 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms