RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pik3ap1Q9EQ32 811 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cd209bQ8CJ91 325 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Panx2Q6IMP4 677 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Kdm5bQ80Y84 1544 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pa2g4P50580 394 aaKnown RBP11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppp1r21Q3TDD9 780 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Spata2Q8K004 515 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rad23aP54726 363 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Calr3Q9D9Q6 380 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rpl13P47963 211 aaKnown RBP11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Nek5Q7TSC3 627 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Gm29094F6Q785 221 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Eps15P42567 897 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Nbr1P97432 988 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc51bQ80WK2 128 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 MthfsQ9D110 203 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccdc7Q9D541 371 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cep83Q9D5R3 692 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Psma7Q9Z2U0 248 aa11.35□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Heatr4E9Q357 955 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Atp1a3Q6PIC6 1013 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Q9D5Q8 446 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 PdclQ9DBX2 301 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Mx2Q9WVP9 655 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tab2Q99K90 693 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tsnaxip1Q99P25 704 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Polr2dQ9D7M8 142 aaKnown RBP11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Serpinb1cQ5SV42 375 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Arhgef2Q60875 985 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Wdr44Q6NVE8 915 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cnot10Q8BH15 744 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 ApobrQ8VBT6 942 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Gm6583E9Q8Z1 469 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Stim2P83093 746 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 HhatQ8BMT9 499 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Fam228aQ8CDW1 299 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 AU022751B1B0V2 589 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Gna11P21278 359 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Scaf1Q5U4C3 1256 aaKnown RBP11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc4a4O88343 1079 aa11.34□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Bpifb4A2BGH0 617 aa11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppfia4B8QI36 1187 aa11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ddx23D3Z0M9 819 aaKnown RBP11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Samd15F6XZJ7 620 aa11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccdc105Q9D4K7 499 aa11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 AnkarA2RT91 1465 aa11.33□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ercc5P35689 1170 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rnf40Q3U319 1001 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rapgef3Q8VCC8 918 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Pprc1Q6NZN1 1644 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Trerf1Q8BXJ2 1205 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cfap57Q9D180 1249 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Nap1l4Q78ZA7 375 aaKnown RBP11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ccdc155Q80VJ8 648 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Jmjd4Q8BFT6 427 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Klhl20Q8VCK5 604 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 ParvgQ9ERD8 331 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Myo1cQ9WTI7 1063 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Fam50bQ9WTJ8 334 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ints8Q80V86 995 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Golga1Q9CW79 758 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 PparaP23204 468 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ppp1r12cQ3UMT1 782 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Mtus1Q5HZI1 1210 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Nop56Q9D6Z1 580 aaKnown RBP11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Klc4Q9DBS5 619 aa11.33□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ncf2O70145 525 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Dnajc25A2ALW5 357 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Fam213aQ9CYH2 218 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Mast3Q3U214 1321 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm2030D3Z7C4 212 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Akr1b8P45377 316 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 RilpQ5ND29 369 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Mcm7Q61881 719 aaKnown RBP11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Retreg2Q6NS82 541 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Efcab14Q8BGQ6 484 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Naa30Q8CES0 364 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rps6ka1P18653 724 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 SbdsP70122 250 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Pfkfb1P70266 471 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 ErmnQ5EBJ4 281 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tex19.1Q99MV2 351 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Saal1Q9D2C2 474 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ythdc2B2RR83 1445 aaKnown RBP11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Prr29B1ARI9 187 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Zscan18E9PUD6 809 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Fgd5Q80UZ0 1219 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rsph3bQ9DA80 389 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Pdrg1P59048 133 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Kif1bpQ6ZPU9 617 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Depdc1bQ8BH88 529 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Sh2b1Q91ZM2 756 aa11.32□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Atp10dQ8K2X1 1416 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Atp2b1G5E829 1220 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 ClgnP52194 611 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ncoa7Q6DFV7 943 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Me3Q8BMF3 604 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Zfp781Q0P5U5 243 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Fbxo3Q9DC63 480 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tbc1d2B1AVH7 922 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 110.3 ms