RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Rai14Q9EP71 979 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pus3Q9JI38 481 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Col20a1Q923P0 1320 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Map7d2A2AG50 781 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cyp26a1O55127 497 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Slc4a1P04919 929 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 SsbP32067 415 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Telo2Q9DC40 840 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ric1Q69ZJ7 1422 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Bin1O08539 588 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sdc2P43407 202 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Igfbp6P47880 238 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Trim56Q80VI1 734 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Zfp317Q8C0Q5 607 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Hs2st1Q8R3H7 356 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Mical1Q8VDP3 1048 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cdan1Q8CC12 1239 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Gzf1Q4VBD9 706 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Luc7l2Q7TNC4 392 aaKnown RBP9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Trim59Q922Y2 403 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Psrc1Q9D0P7 329 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Add3Q9QYB5 706 aaKnown RBP9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Myo3bQ1EG27 1305 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cd3dP04235 173 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 CebpzP53569 1052 aaKnown RBP9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Triml1Q8BVP1 470 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ripk4Q9ERK0 786 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cxcl11Q9JHH5 100 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Usp28Q5I043 1051 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tbc1d31Q6NXY1 996 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ankrd13dQ6PD24 605 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Stac3Q8BZ71 360 aa9.72□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Rps8P62242 208 aaKnown RBP9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ccdc172Q810N9 267 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sptlc3Q8BG54 563 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Calml3Q9D6P8 149 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Susd4Q8BH32 490 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Q8BZJ8 459 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Zfp202Q8C879 641 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Emilin1Q99K41 1017 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cyp3a59D3Z2W7 503 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ifit1Q64282 463 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Dbndd1Q9CZ00 160 aa9.71□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Prr16A3KMN5 304 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Zbtb21E9Q444 1094 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ubap1lG3UW59 384 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Stat5bP42232 786 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Gnl2Q99LH1 728 aaKnown RBP9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Kcnh3Q9WVJ0 1095 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccne2Q9Z238 404 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Gm43638A0A0J9YU36 694 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc191J3QQ27 883 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Stx8O88983 236 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tet3Q8BG87 1668 aa9.71□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 AtrnQ9WU60 1428 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Adck5Q80V03 582 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Hexim1Q8R409 356 aaKnown RBP9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Bcl9lQ67FY2 1494 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Lipo1J3QME6 396 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 GmnnO88513 206 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Atp1b3P97370 278 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tbc1d2bQ3U0J8 965 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pank2Q3U4S0 443 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Atp1a3Q6PIC6 1013 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Map10Q8BJS7 891 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ces1aE9PYP1 563 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc121E9Q6D3 323 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Olfr118Q7TRJ6 321 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Lrrc2Q8VDB8 371 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pik3ap1Q9EQ32 811 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pde11aP0C1Q2 933 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 MarcksP26645 309 aaKnown RBP9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Brd3Q8K2F0 726 aaKnown RBP9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc94Q9D6J3 314 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Casp12O08736 419 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pde6aP27664 859 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Kif22Q3V300 660 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ift122Q6NWV3 1182 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Hps6Q8BLY7 805 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 CpvlQ9D3S9 478 aa9.7□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ctdnep1Q3TP92 244 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Znhit6Q3UFB2 460 aaKnown RBP9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Zcrb1Q9CZ96 217 aaKnown RBP9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tcof1O08784 1320 aaKnown RBP9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ms4a1P19437 291 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Fam170aQ66LM6 333 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tacc1Q6Y685 774 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Dusp9Q7TNL7 452 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Snapc4Q8BP86 1333 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Siglec1Q62230 1695 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Robo1O89026 1612 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 NefhP19246 1090 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pfkfb1P70266 471 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tekt3Q6X6Z7 490 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Uchl5Q9WUP7 329 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cep135Q6P5D4 1140 aa9.69□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Myl10Q62082 202 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pold4Q9CWP8 107 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Phlpp1Q8CHE4 1687 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Mapkapk5O54992 473 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms