RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Znf394Q9Z1D9 521 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Casp8O89110 480 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Surf6P70279 355 aaKnown RBP10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Kcna6Q61923 529 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Panx2Q6IMP4 677 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Nfu1Q9QZ23 255 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 DnmbpQ6TXD4 1580 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Enc1O35709 589 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 NagaQ9QWR8 415 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Elp1Q7TT37 1333 aaKnown RBP10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pik3r4Q8VD65 1358 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Zscan20B2KFW1 1030 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Krt14Q61781 484 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 PolnQ7TQ07 864 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Hps6Q8BLY7 805 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Sept7O55131 436 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Atp8b1Q148W0 1251 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Klra4Q60651 263 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Mettl5Q8K1A0 209 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Trim29Q8R2Q0 587 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ecel1Q9JMI0 775 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Arhgef1Q61210 920 aaKnown RBP10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Fhod1Q6P9Q4 1197 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Necab1Q8BG18 352 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tada3Q8R0L9 432 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Zmat2Q9CPW7 199 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cul3Q9JLV5 768 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Kansl3A2RSY1 903 aaKnown RBP10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Spata31d1bE9QA57 1361 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Hcls1P49710 486 aaKnown RBP10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Skap2Q3UND0 358 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pdzrn3Q69ZS0 1063 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 HhatQ8BMT9 499 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tbc1d4Q8BYJ6 1307 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ttc27Q8CD92 847 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Stag1Q9D3E6 1258 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Rsph3bQ9DA80 389 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Osbpl5Q9ER64 874 aa10.44□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Uggt1Q6P5E4 1551 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gm21969J3QJZ1 289 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 ChkbO55229 394 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 FntaQ61239 377 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Arl13bQ640N2 427 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ppp2r2cQ8BG02 447 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gpt2Q8BGT5 522 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Hpcal4Q8BGZ1 191 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Sgsm1Q8BPQ7 1093 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Fam133bQ9CVI2 245 aaKnown RBP10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 CoblQ5NBX1 1337 aaKnown RBP10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gnat1P20612 350 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Q3UPC7 1272 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Mylk4Q5SUV5 386 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Q8BZJ8 459 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 PplQ9R269 1755 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cep85lA0A1W2P884 806 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tdo2P48776 406 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pdrg1P59048 133 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Sap30bpQ02614 308 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Fhdc1Q3ULZ2 1149 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gle1Q8R322 699 aa10.43□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gucy2cQ3UWA6 1072 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Trim27Q62158 513 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Baiap3Q80TT2 1134 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Lrrc45Q8CIM1 670 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 AticQ9CWJ9 592 aaKnown RBP10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ildr2B5TVM2 661 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 RcvrnP34057 202 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cd22P35329 862 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 LifrP42703 1092 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 HdgfP51859 237 aaKnown RBP10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ehbp1Q69ZW3 1231 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Bsdc1Q80Y55 427 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gtpbp10Q8K013 366 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Jph2Q9ET78 696 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gm1979E9QAN3 267 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Samd15F6XZJ7 620 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Rps6ka3P18654 740 aaKnown RBP10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pold1P52431 1105 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Q3TQI7 289 aaKnown RBP10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Fam71bQ5STT6 665 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ddx11Q6AXC6 880 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Kiaa1328Q6NZK5 612 aa10.42□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ehbp1l1Q99MS7 1716 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Slit3Q9WVB4 1523 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Krt90E9Q1Z0 538 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Atad2Q8CDM1 1040 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tbc1d7Q9D0K0 293 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cul4bA2A432 970 aaKnown RBP10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gm3415J3QMS8 315 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Birc3O08863 600 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 IntuQ059U7 942 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Igf2bp2Q5SF07 592 aaKnown RBP10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 PapolaQ61183 739 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pde3bQ61409 1100 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Clec16aQ80U30 1036 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cep104Q80V31 926 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Sec62Q8BU14 398 aaKnown RBP10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Zfp446Q8C9M8 523 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Top1mtQ8R4U6 593 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms