RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Smarcc1P97496 1104 aa20.28■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Cdr2P97817 455 aa20.28■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 ZyxQ62523 564 aa20.28■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Slit1Q80TR4 1531 aa20.28■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Gm20425E9Q035 978 aaKnown RBP20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 SrprbP47758 269 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Epha2Q03145 977 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Slc7a1Q09143 622 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Arhgef16Q3U5C8 713 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Ppp4r3aQ6P2K6 820 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Snd1Q78PY7 910 aaKnown RBP20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 Necab1Q8BG18 352 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 TatQ8QZR1 454 aa20.27■□□□□ 0.84
Sqstm1-201ENSMUST00000015981 D430041D05RikF6ZGR6 1678 aa20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 HrQ61645 1182 aa20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ripor2Q80U16 1078 aa20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Rrp1bQ91YK2 724 aaKnown RBP20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Coro7Q9D2V7 922 aa20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 RabggtaQ9JHK4 567 aa20.27■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Exoc8Q6PGF7 716 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Haus7Q8BKT8 364 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Cgref1Q8R1U2 281 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gm10563F6WIE4 79 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Timm10P62073 90 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Tubb4bP68372 445 aaKnown RBP20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Psmb7P70195 277 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 LbrQ3U9G9 626 aaKnown RBP20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 NfkbibQ60778 359 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ltv1Q6NSQ7 470 aaKnown RBP20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Shisa4Q8CA71 197 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Mrps25Q9D125 171 aaKnown RBP20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Baiap2l1Q9DBJ3 514 aa20.26■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Npc1l1Q6T3U4 1333 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Prl2c1Q5SVL9 228 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Enox1Q8BHR2 643 aaKnown RBP20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Zkscan3Q91VW9 553 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Topaz1E5FYH1 1653 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Cep63Q3UPP8 700 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 ItgadQ3V0T4 1168 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Tubb2aQ7TMM9 445 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Tubb2bQ9CWF2 445 aa20.25■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gcom1E9PZ54 550 aa20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 MyzapQ3UIJ9 466 aa20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Cep112Q5PR68 954 aa20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ppp1r37Q8BKR5 712 aa20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Dnm1P39053 867 aa20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Syf2Q9D198 242 aaKnown RBP20.24■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Sult6b1P0CC03 303 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Kifap3P70188 793 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gnat3Q3V3I2 354 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Nab2Q61127 525 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Vps37dQ810I0 261 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ccdc150Q8CDI7 1110 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Krt25Q8VCW2 446 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Arap3Q8R5G7 1538 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 MypnQ5DTJ9 1315 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Nek1P51954 1203 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Tcp11l1Q8BTG3 509 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Phldb2Q8K1N2 1249 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Rdm1Q9CQK3 281 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Als2Q920R0 1651 aa20.23■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gm10471E9Q1C7 252 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Adssl1P28650 457 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Traf1P39428 409 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ccdc93Q7TQK5 629 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ribc1Q9D0B8 379 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Soga3Q6NZL0 945 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Znf653Q6YND2 615 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Uap1Q91YN5 522 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Carmil3Q3UFQ8 1375 aa20.22■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Zmym1Q3TJB1 983 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Prl3d3A0A0M6L0J6 224 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 A0A1W2P6Q8 802 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gm9048A0A1W2P7H4 802 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 A0A1W2P7S8 802 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 A0A1W2P7Z8 802 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Gm9046A0A1W2P855 802 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Ppfia4B8QI36 1187 aa20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Epb41l2O70318 988 aaKnown RBP20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Cdc5lQ6A068 802 aaKnown RBP20.21■□□□□ 0.83
Sqstm1-201ENSMUST00000015981 Rnf40Q3U319 1001 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 AcrbpQ3V140 540 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Def6Q8C2K1 630 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 CpdO89001 1377 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tubb5P99024 444 aaKnown RBP20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Iqsec3Q3TES0 1195 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Pip4k2bQ80XI4 416 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Lrrc2Q8VDB8 371 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 PpanQ91YU8 470 aaKnown RBP20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Gm21671G3UY31 267 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tdo2P48776 406 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 CebpaP53566 359 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Mrps31Q61733 384 aaKnown RBP20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Atg9aQ68FE2 551 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 ImmtQ8CAQ8 757 aaKnown RBP20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 NenfQ9CQ45 171 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 NapgQ9CWZ7 312 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Fam84aQ9D650 292 aa20.2■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Sox5P35710 763 aa20.19■□□□□ 0.82
Sqstm1-201ENSMUST00000015981 Tsr1Q5SWD9 803 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms