RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 AceP09470 1312 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Prl3d2F6R3P9 224 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cops6O88545 324 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 NfkbibQ60778 359 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ncoa7Q6DFV7 943 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Panx2Q6IMP4 677 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Rad17Q6NXW6 688 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ubac1Q8VDI7 409 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cct6aP80317 531 aaKnown RBP14.33□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ube2oQ6ZPJ3 1288 aa14.33□□□□□ -0.11
Msh6-201ENSMUST00000005503 Erlin2Q8BFZ9 340 aa14.33□□□□□ -0.11
Msh6-201ENSMUST00000005503 Zc3h6Q8BYK8 1177 aa14.33□□□□□ -0.11
Msh6-201ENSMUST00000005503 Tex13c2A0A0G2JGA3 530 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 PparaP23204 468 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Znf335A2A5K6 1337 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gm32742A0A1B0GT42 1604 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Zfp853A0A1D5RM95 733 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Nfxl1E9Q8I7 918 aaKnown RBP14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pde11aP0C1Q2 933 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cyp2d11P24457 504 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Nlrp1aQ2LKU9 1182 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 MmeQ61391 750 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Bola3Q8CEI1 110 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Plekhg1F6S200 1446 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Abca6Q8K441 1624 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Col1a2Q01149 1372 aa14.33□□□□□ -0.12
Msh6-201ENSMUST00000005503 Fbf1A2A870 1173 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Otud7bB2RUR8 840 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Sf3b2Q3UJB0 878 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Mdh1bQ5F204 500 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ccdc42Q5SV66 316 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Nek9Q8K1R7 984 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pdcd11Q6NS46 1862 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ube3aO08759 870 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Smco2Q9DA21 347 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Usp42B2RQC2 1324 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Izumo3A6PWV3 263 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Rsph10bE9PYQ0 876 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gm10378F6XQQ1 160 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Lipo1J3QME6 396 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ftl2P49945 183 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cct5P80316 541 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 CalrP14211 416 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Sdad1Q80UZ2 687 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cfap100Q80VN0 613 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 RarsQ9D0I9 660 aaKnown RBP14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Q9D5Q8 446 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 Mipol1Q9D9F8 279 aa14.32□□□□□ -0.12
Msh6-201ENSMUST00000005503 XpcP51612 930 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 C87499Q3UX49 493 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 CpvlQ9D3S9 478 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Dnmt1P13864 1620 aaKnown RBP14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Prr16A3KMN5 304 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cd209bQ8CJ91 325 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Mei1Q9D4I2 1268 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pkd2l2Q9JLG4 621 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Aox4Q3TYQ9 1336 aa14.31□□□□□ -0.12
Msh6-201ENSMUST00000005503 Samd15F6XZJ7 620 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gucy1b3O54865 620 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Adcy3Q8VHH7 1145 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Speer4aF8VPX6 267 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Tsg101Q61187 391 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Spocd1B1ASB6 936 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Tax1bp1Q3UKC1 814 aaKnown RBP14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Itga6Q61739 1091 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Mb21d2Q8C525 428 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Rbm43Q99J64 343 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Txnrd1Q9JMH6 613 aa14.3□□□□□ -0.12
Msh6-201ENSMUST00000005503 Tekt3Q6X6Z7 490 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ubxn10Q8BG34 277 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cep128Q8BI22 1102 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 DlatQ8BMF4 642 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Tmem119Q8R138 280 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cbx6Q9DBY5 414 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 InsrrQ9WTL4 1300 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Dnajc21E9Q8D0 531 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 IntuQ059U7 942 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 PsdQ5DTT2 1024 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Mcm7Q61881 719 aaKnown RBP14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Acap3Q6NXL5 833 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Krit1Q6S5J6 736 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ddx10Q80Y44 875 aaKnown RBP14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ankk1Q8BZ25 745 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Zmynd15Q8C0R7 736 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Hgh1Q8C3I8 393 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gm28919A0A087WP35 240 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Usp5P56399 858 aaKnown RBP14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Lrrd1Q8C0R9 853 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Kcnq3Q8K3F6 873 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Slc14a2Q8R4T9 930 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Zbtb40Q6PCS8 1258 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 E4f1Q8CCE9 783 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Smtnl1Q99LM3 459 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 Letm1Q9Z2I0 738 aa14.29□□□□□ -0.12
Msh6-201ENSMUST00000005503 ShprhQ7TPQ3 1674 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Setdb1O88974 1307 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Cep170bQ80U49 1574 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Naa15Q80UM3 865 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Ublcp1Q8BGR9 318 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Epc1Q8C9X6 813 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms