RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Srek1Q8BZX4 494 aaKnown RBP18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Fam114a1Q9D281 569 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Vps33aQ9D2N9 598 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Metap2O08663 478 aaKnown RBP18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Serpinb6bO08804 377 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Diaph1O08808 1255 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Plbd2Q3TCN2 594 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Susd4Q8BH32 490 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Stac3Q8BZ71 360 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Abcb6Q9DC29 842 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 IcoslgQ9JHJ8 322 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Dctn1O08788 1281 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Me1P06801 572 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Fkbp1aP26883 108 aaKnown RBP18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Washc4Q3UMB9 1173 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Miga2Q8BK03 593 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Fam43aQ8BUP8 424 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Tmem87aQ8BXN9 555 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Vps18Q8R307 973 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Tmx1Q8VBT0 278 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Eaf2Q91ZD6 262 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Creld2Q9CYA0 350 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Plekho1Q9JIY0 408 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Rgs12Q8CGE9 1381 aa18.94■□□□□ 0.62
Shh-201ENSMUST00000002708 Pde6aP27664 859 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Il17raQ60943 864 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Slf2Q6P9P0 1278 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Telo2Q9DC40 840 aaKnown RBP18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Mroh6V9GX81 722 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Cfap44E9Q5M6 1843 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Mast3Q3U214 1321 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Ccng2O08918 344 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Ces1dQ8VCT4 565 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Atp12aQ9Z1W8 1035 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Mast2Q60592 1734 aa18.93■□□□□ 0.62
Shh-201ENSMUST00000002708 Cdc27A2A6Q5 825 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Dnm1P39053 867 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Epha2Q03145 977 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Prl2c1Q5SVL9 228 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Esco1Q69Z69 843 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Rec8Q8C5S7 591 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Paxbp1P58501 919 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Cdc37Q61081 379 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Pcdhb14Q6PB90 796 aa18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Kri1Q8VDQ9 704 aaKnown RBP18.92■□□□□ 0.62
Shh-201ENSMUST00000002708 Lcmt1A0A0U1RNF2 332 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Actn3O88990 900 aaKnown RBP18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Gm28047Q3US59 414 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Mical1Q8VDP3 1048 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Yeats4Q9CR11 227 aaKnown RBP18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Pde4bB1AWC9 736 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Gm10134F6ZQC6 126 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Ugt1a6bK9J7B2 531 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 ErmnQ5EBJ4 281 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Ugt1a6Q64435 531 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Ugt1a7cQ6ZQM8 531 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Ufl1Q8CCJ3 793 aaKnown RBP18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Bola3Q8CEI1 110 aa18.91■□□□□ 0.62
Shh-201ENSMUST00000002708 Marf1Q8BJ34 1730 aaKnown RBP18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Myh3P13541 1940 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Gm4340L7N2C4 268 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Grin1P35438 938 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Snrpa1P57784 255 aaKnown RBP18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Dnajc5P60904 198 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Prpf4bQ61136 1007 aaKnown RBP18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Agtpbp1Q641K1 1218 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Pnpla2Q8BJ56 486 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Mtmr6Q8VE11 617 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Trim34aQ99PP6 485 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Lrp5Q91VN0 1614 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Kndc1Q0KK55 1742 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 FAM186AQ9D9R9 1790 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 NapbP28663 298 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Kcnj4P52189 445 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Cplx1P63040 134 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Cep120Q7TSG1 988 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Ulbp1Q8HWA3 334 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 CpdO89001 1377 aa18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Znfx1Q8R151 1909 aaKnown RBP18.9■□□□□ 0.62
Shh-201ENSMUST00000002708 Speer4dL7N216 212 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Dnajc2P54103 621 aaKnown RBP18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Gimap5Q8BWF2 308 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Gnl2Q99LH1 728 aaKnown RBP18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Krt84Q99M73 603 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Med23Q80YQ2 1367 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 AW822073A0A0N4SUK1 652 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Krt24A1L317 512 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Dpf2Q61103 391 aaKnown RBP18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Trim25Q61510 634 aaKnown RBP18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Popdc2Q9ES82 367 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 4931408C20RikE9PWP9 1381 aa18.89■□□□□ 0.61
Shh-201ENSMUST00000002708 Cyp2c23E9Q5K4 494 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 CrcpO35427 148 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Cep63Q3UPP8 700 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Znf653Q6YND2 615 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Wdr3Q8BHB4 942 aaKnown RBP18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Ercc6lQ8BHK9 1240 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Ranbp6Q8BIV3 1105 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Rbm43Q99J64 343 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Zbtb7aO88939 569 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms