RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 M0QZQ0 153 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 TCRAP04437 139 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 HLA-DRB4P13762 266 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 LOXL3P58215 753 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SSC4DQ8WTU2 575 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 RNF126Q9BV68 326 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 AAMDCQ9H7C9 122 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 HLA-DRB4X5D2U9 266 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 CACNA1GO43497 2377 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 APCSP02743 223 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF136P52737 540 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 DEFB110Q30KQ9 67 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 CRYM-AS1A6NIL9 109 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 DEFB134Q4QY38 66 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF441Q8N8Z8 693 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 WFDC11Q8NEX6 87 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 CCL21O00585 134 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SYNGR2O43760 224 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF56Q15929 161 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 PLEKHA3Q9HB20 300 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 C5orf63A6NC05 138 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 FOXC1Q12948 553 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 C12orf73Q69YU5 71 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 FAM19A2Q8N3H0 131 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 H1FXQ92522 213 aaKnown RBP3.51□□□□□ -1.85
SCN3A-209ENST00000639244 MBD6Q96DN6 1003 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 DPH3Q96FX2 82 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 EPDR1Q9UM22 224 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 IGHV1-24A0A0C4DH33 117 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 NDUFB2O95178 105 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-209ENST00000639244 FAM90A2PQ658T7 463 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 CACNA1HO95180 2353 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 IGF2RP11717 2491 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 K7ENP7 123 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 COX6A1P12074 109 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 SCRT1Q9BWW7 348 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 SPRY2O43597 315 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 CD55P08174 381 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-209ENST00000639244 SERF2P84101 59 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 FAM219BQ5XKK7 198 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 KCTD18Q6PI47 426 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-209ENST00000639244 LINC00305Q7Z4B0 112 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 DSCR8Q96T75 97 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 DYNLRB1Q9NP97 96 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 TSKUQ8WUA8 353 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 UBE2L5PA0A1B0GUS4 154 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 GHRHP01286 108 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 ASAH2BP0C7U1 165 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 GATA2P23769 480 aaPredicted RBP3.51□□□□□ -1.85
SCN3A-209ENST00000639244 LINC01561Q8N1V8 128 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 H3BP45 60 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 ACYP1P07311 99 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 SAA4P35542 130 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 CEND1Q8N111 149 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 VKORC1Q9BQB6 163 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 OCIAD1Q9NX40 245 aa3.51□□□□□ -1.85
SCN3A-209ENST00000639244 FOXA3P55318 350 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF493Q6ZR52 646 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 BCL6BQ8N143 479 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 TAAR2Q9P1P5 351 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 LOC107986453A0A1B0GWG9 222 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 NCBP2LA6PVI3 153 aaKnown RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 IGFBP6P24592 240 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 RPL23P62829 140 aaKnown RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 FAM27E3Q08E93 113 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 FOXF1Q12946 379 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 SMRP1Q8NCR6 262 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 FLG2Q5D862 2391 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 GASTP01350 101 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 PSMB2P49721 201 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 RPL30P62888 115 aaKnown RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 TRIP6Q15654 476 aaKnown RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 CFAP126Q5VTH2 177 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 AJUBAQ96IF1 538 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 METTL26Q96S19 204 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 HIGD1BQ9P298 99 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 A0A1B0GTH9 108 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 SPRNQ5BIV9 151 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 ADAMTS7Q9UKP4 1686 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 TRAV4A0A0B4J268 109 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 C11orf94C9JXX5 98 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 ZC2HC1AQ96GY0 325 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 KLK13Q9UKR3 277 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 SLIT2O94813 1529 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 SPEM2Q0P670 501 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 DGAT2L6Q6ZPD8 337 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 LY6G5BQ8NDX9 201 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 AGPAT4-IT1Q9H0P7 198 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 R3HDMLQ9H3Y0 253 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 EP300Q09472 2414 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-209ENST00000639244 OTOGLQ3ZCN5 2332 aa3.5□□□□□ -1.85
SCN3A-209ENST00000639244 SMKR1H3BMG3 65 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms