RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 DEFB108BQ8NET1 73 aa5.9□□□□□ -1.46
SCARB2-209ENST00000638409 OR8B3Q8NGG8 313 aa5.9□□□□□ -1.46
SCARB2-209ENST00000638409 OR8B2Q96RD0 313 aa5.9□□□□□ -1.46
SCARB2-209ENST00000638409 FBXL15Q9H469 300 aa5.9□□□□□ -1.46
SCARB2-209ENST00000638409 LSM5Q9Y4Y9 91 aaKnown RBP5.9□□□□□ -1.46
SCARB2-209ENST00000638409 MSMBP08118 114 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 SNRPCP09234 159 aaKnown RBP5.9□□□□□ -1.47
SCARB2-209ENST00000638409 SULT1A2P50226 295 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 RAB5CP51148 216 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 OR51T1Q8NGJ9 327 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 GAFA1Q96PS6 74 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 GPER1Q99527 375 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 CTSZQ9UBR2 303 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 ANAPC10Q9UM13 185 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 CREBBPQ92793 2442 aa5.9□□□□□ -1.47
SCARB2-209ENST00000638409 IFITM10A6NMD0 228 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 MFNGO00587 321 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 HPRT1P00492 218 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF25P17030 456 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 REG1BP48304 166 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 FGF12P61328 243 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 IAH1Q2TAA2 248 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 KLF17Q5JT82 389 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 C1QL2Q7Z5L3 287 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 CD177Q8N6Q3 437 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 OR10W1Q8NGF6 305 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 C9orf85Q96MD7 179 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 C7orf77A4D0Y5 90 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 PRAC2D3DTV9 90 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 TSTD3H0UI37 97 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 ANGPTL7O43827 346 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 YIF1AO95070 293 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 GNB2P62879 340 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 IL15RAQ13261 267 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 KIAA1644Q3SXP7 199 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 LHFPL1Q86WI0 220 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 CCL13Q99616 98 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 SMR3AQ99954 134 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF430Q9H8G1 570 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 K7EPK0 472 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 CRXO43186 299 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 REG3AQ06141 175 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF616Q08AN1 781 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 LINC00596Q86U02 117 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 PNKDQ8N490 385 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 FAM71E2Q8N5Q1 922 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 LY6G5BQ8NDX9 201 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 OR2D3Q8NGH3 330 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 HDHD3Q9BSH5 251 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 CLEC7AQ9BXN2 247 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 PARP11Q9NR21 331 aa5.89□□□□□ -1.47
SCARB2-209ENST00000638409 C15orf61A6NNL5 157 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 K7N7A8 449 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 NDUFB3O43676 98 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF737O75373 536 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 S100A2P29034 98 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 RSU1Q15404 277 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 LRRC10Q5BKY1 277 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 Q6P435 159 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 STPG4Q8N801 248 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 UBAC2Q8NBM4 344 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 WFDC1Q9HC57 220 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 PSG11Q9UQ72 335 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 ABCA2Q9BZC7 2435 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 ZANQ9Y493 2812 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 HAND1O96004 215 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 MT-ND4LP03901 98 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 HOXA5P20719 270 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 BLVRBP30043 206 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-209ENST00000638409 PAX8Q06710 450 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 CHRFAM7AQ494W8 412 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 EIF5AL1Q6IS14 154 aaKnown RBP5.88□□□□□ -1.47
SCARB2-209ENST00000638409 FAM19A5Q7Z5A7 132 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-209ENST00000638409 OSR2Q8N2R0 312 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 FAM24BQ8N5W8 94 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 FAM216BQ8N7L0 139 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 NRACQ8N912 160 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 S100A13Q99584 98 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 SH3BGRL3Q9H299 93 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 VPREB3Q9UKI3 123 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF257Q9Y2Q1 563 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 INSIG2Q9Y5U4 225 aa5.88□□□□□ -1.47
SCARB2-209ENST00000638409 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 TAAR5O14804 337 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 DLEU1O43261 78 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 DEDDO75618 318 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 VENTXO95231 258 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 GABRA2P47869 451 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 DLX1P56177 255 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 RPL32P62910 135 aaKnown RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 EIF5AP63241 154 aaKnown RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 COL10A1Q03692 680 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 SP6Q3SY56 376 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 FAM231DQ6ZW35 169 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 LGI3Q8N145 548 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 PIFOQ8TCI5 191 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF2Q9BSG1 426 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms