RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PIPP12273 146 aaPredicted RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 HLA-EP13747 358 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TNNI1P19237 187 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SDC4P31431 198 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 MRPL19P49406 292 aaKnown RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 RAB13P51153 203 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 CDC42P60953 191 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 STX1BP61266 288 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 ARF6P62330 175 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SSBP1Q04837 148 aaKnown RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 HIKESHIQ53FT3 197 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 NIPAL3Q6P499 406 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 MIR17HGQ75NE6 70 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 S100A7AQ86SG5 101 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 DOK4Q8TEW6 326 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 CDKL2Q92772 493 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 TSR2Q969E8 191 aaKnown RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SLC38A2Q96QD8 506 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 EBPLQ9BY08 206 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 MAF1Q9H063 256 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 IQCGQ9H095 443 aaKnown RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SPC25Q9HBM1 224 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 UQCC1Q9NVA1 299 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 NXT1Q9UKK6 140 aaKnown RBP-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 SNX5Q9Y5X3 404 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 ARL5AQ9Y689 179 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 USP47Q96K76 1375 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 CUX2O14529 1486 aa-1.9□□□□□ -2.71
CDKL5-210ENST00000636046 AKNAQ7Z591 1439 aa-1.91□□□□□ -2.71
CDKL5-210ENST00000636046 MYO5BQ9ULV0 1848 aa-1.91□□□□□ -2.71
CDKL5-210ENST00000636046 A0A1B0GW64 132 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 BICDL2A1A5D9 508 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 C7orf71A4D174 169 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 URADA6NGE7 173 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 H7C0C1 242 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 I3L3M4 83 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 PSMD11O00231 422 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 DFFAO00273 331 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 CCL22O00626 93 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 ARPC5O15511 151 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 NEMFO60524 1076 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 OR2J2O76002 312 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 IGKCP01834 107 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TCRBP04435 133 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 FGF6P10767 208 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 SLC2A1P11166 492 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 OR1E1P30953 314 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 DEKP35659 375 aaKnown RBP-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 ATP5OP48047 213 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 BTG2P78543 158 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 IFITM2Q01629 132 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 SLAMF1Q13291 335 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 GPM6BQ13491 265 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 AKR1C8PQ5T2L2 129 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 RIPPLY2Q5TAB7 128 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 Q6JHZ5 121 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 RWDD4Q6NW29 188 aaKnown RBP-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM91Q6ZNR0 172 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 SZRD1Q7Z422 152 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 SPATA19Q7Z5L4 167 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 FAM223AQ8IWN6 122 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 NELFCDQ8IXH7 590 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TTC9CQ8N5M4 171 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM161BQ8NDZ6 487 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 OR7G1Q8NGA0 311 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 OR52E4Q8NGH9 312 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 OR5AK2Q8NH90 309 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 RAB1CQ92928 201 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 DIRAS2Q96HU8 199 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 C2orf50Q96LR7 162 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 MTMR9Q96QG7 549 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 COPS4Q9BT78 406 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 RAB1BQ9H0U4 201 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 ATG5Q9H1Y0 275 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 NDUFA4L2Q9NRX3 87 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 PTTG3PQ9NZH4 202 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 CRIPTQ9P021 101 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 CCDC59Q9P031 241 aaKnown RBP-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 COMMD3Q9UBI1 195 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 UXTQ9UBK9 157 aaPredicted RBP-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 C3orf18Q9UK00 162 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 B9D1Q9UPM9 204 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 LIPT1Q9Y234 373 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 PRELID1Q9Y255 219 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 PATJQ8NI35 1801 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 CUX1P39880 1505 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TOPBP1Q92547 1522 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 TULP4Q9NRJ4 1543 aa-1.91□□□□□ -2.72
CDKL5-210ENST00000636046 CCDC88AQ3V6T2 1871 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 DLEC1Q9Y238 1755 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 SETBP1Q9Y6X0 1596 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 A0A0B4J2E0 115 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 FAM236AA0A1B0GUQ0 79 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 FAM236BA0A1B0GV22 79 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 TMEM30CPA0ZSE6 113 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 C17orf112F2Z3M2 114 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 GOLGA8SH3BPF8 625 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 CDC42EP2O14613 210 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 RAB29O14966 203 aa-1.92□□□□□ -2.72
CDKL5-210ENST00000636046 OR1F1O43749 312 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms