RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CIDEAO60543 219 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 CLEC2AQ6UVW9 174 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 H0Y8G0 127 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 ZNF138P52744 262 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 ARRDC1-AS1Q9H2J1 176 aa11.86□□□□□ -0.51
CACNA1A-220ENST00000635988 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 MC5RP33032 325 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 C2orf91Q6ZV80 131 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 FA2HQ7L5A8 372 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 TMEM14CQ9P0S9 112 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 GAGE10A6NGK3 116 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 LGALS7P47929 136 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
CACNA1A-220ENST00000635988 A6NDN8 102 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 MBD3L4A6NDZ8 208 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 CSN3P07498 182 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 FAM87AP0C7U9 286 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 CD59P13987 128 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 PAX2Q02962 417 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 Q6AWC8 147 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 HIGD1AQ9Y241 93 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 SLC25A17O43808 307 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 CCL11P51671 97 aa11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 MCRIP2Q9BUT9 160 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-220ENST00000635988 FRYQ5TBA9 3013 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 IGFL2Q6UWQ7 119 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 DHRS13Q6UX07 377 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 H3BRM9 83 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 CCL3L1P16619 93 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 HES3Q5TGS1 186 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 PRNTQ86SH4 94 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 RPRMLQ8N4K4 120 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
CACNA1A-220ENST00000635988 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 DYSFO75923 2080 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 TMEM200BQ69YZ2 307 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 TEX45Q8NA69 505 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 TIMM8BQ9Y5J9 83 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 IGLV2-11P01706 119 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 HCP5Q6MZN7 132 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 GOLT1AQ6ZVE7 132 aa11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 SRSF12Q8WXF0 261 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-220ENST00000635988 C9orf118A6NHY6 69 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 H3BTX0 84 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 K7EQM0 130 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 OVOL3O00110 214 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 ZNF474Q6S9Z5 364 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 TMEM75Q8N9X5 138 aa11.81□□□□□ -0.52
CACNA1A-220ENST00000635988 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 SIVA1O15304 175 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 LGALS9CQ6DKI2 356 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 OR9G4Q8NGQ1 327 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 FGF6P10767 208 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 MEGF9Q9H1U4 602 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
CACNA1A-220ENST00000635988 HSD52Q0P140 79 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 MRGPRG-AS1Q2M3A8 158 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 FER1L6-AS1Q8NA97 138 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 INTS1Q8N201 2190 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 LYZP61626 148 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 BOD1L2Q8IYS8 172 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 LYPD1Q8N2G4 141 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 ZADH2Q8N4Q0 377 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 ZC2HC1AQ96GY0 325 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 COL25A1Q9BXS0 654 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 KNTC1P50748 2209 aa11.79□□□□□ -0.52
CACNA1A-220ENST00000635988 NHLH1Q02575 133 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms