RNA–Protein interactions for RNA: ENST00000635030.1

SMARCA2-233, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 4

Gene SMARCA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-233	ENST00000635030	OR4C13	Q8NGP0	309 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	OR1L4	Q8NGR5	311 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	PRSS3P2	Q8NHM4	247 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	TMEM158	Q8WZ71	300 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	SPTSSA	Q969W0	71 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	SNRNP40	Q96DI7	357 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	COX14	Q96I36	57 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	LINC01587	Q99440	93 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	NUDT22	Q9BRQ3	303 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	IMUP	Q9GZP8	106 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	RPP21	Q9H633	154 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	ZNF492	Q9P255	531 aa		4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	F11R	Q9Y624	299 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-233	ENST00000635030	TRAV24	A0A0B4J272	114 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	C15orf62	A8K5M9	175 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030		M0R2P5	195 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	RRH	O14718	337 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MGST3	O14880	152 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	IGKV1-39	P01597	117 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	IGLV2-8	P01709	118 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	HBD	P02042	147 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	APOH	P02749	345 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	IGKV1D-39	P04432	117 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MYF5	P13349	255 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CD27	P26842	260 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	IGLV3-21	P80748	117 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	RIG	Q13278	110 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TWIST1	Q15672	202 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CST6	Q15828	149 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TMEM52B	Q4KMG9	183 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	GDF5OS	Q5U4N7	250 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	AMTN	Q6UX39	209 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	NFE4	Q86UQ8	179 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	PDPN	Q86YL7	162 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CIART	Q8N365	385 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	C3orf22	Q8N5N4	141 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	GATD1	Q8NB37	220 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	OR8A1	Q8NGG7	326 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	OR1L8	Q8NGR8	309 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	IFI27L1	Q96BM0	104 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TMEM101	Q96IK0	257 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	HIST1H4G	Q99525	98 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TCF19	Q9Y242	345 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	LRP4	O75096	1905 aa		4.27	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRBV25-1	A0A075B6N4	114 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRAV8-2	A0A0B4J237	113 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRAV8-4	A0A0B4J246	113 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030		A0A1W2PQF6	199 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FRG2C	A6NGY1	282 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MS4A18	H0YCH9	400 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030		K7ERJ3	54 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	SPRY1	O43609	319 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CRLF1	O75462	422 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ATP5L	O75964	103 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ACTL6B	O94805	426 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TNFRSF6B	O95407	300 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CLDN14	O95500	239 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CRYGD	P07320	174 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CYBA	P13498	195 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	PSMB2	P49721	201 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	DSCR4	P56555	118 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CACNG7	P62955	275 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FHL3	Q13643	280 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	OR1C1	Q15619	314 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MS4A18	Q3C1V0	323 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	PIGY	Q3MUY2	71 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	PLXDC1	Q8IUK5	500 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FGFRL1	Q8N441	504 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030		Q8N7P7	452 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	LINC00526	Q96FQ7	95 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	LYZL4	Q96KX0	146 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CARD19	Q96LW7	228 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	KIR2DL4	Q99706	377 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ASCL2	Q99929	193 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	SRSF8	Q9BRL6	282 aa	Known RBP	4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ZNF355P	Q9NSJ1	428 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030		Q9Y3F1	56 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MYOF	Q9NZM1	2061 aa		4.26	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRAV2	A0A0B4J234	112 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRAV4	A0A0B4J268	109 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CCL15-CCL14	A0A0B4J2E2	113 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TRBV7-7	A0A0K0K1E9	115 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MYMX	A0A1B0GTQ4	84 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FAM240A	A0A1B0GVK7	77 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	NCBP2L	A6PVI3	153 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	NPY	P01303	97 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030		P01737	135 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	LGALS1	P09382	135 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CISD3	P0C7P0	127 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	LINC00271	P0C7V0	271 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	CECR9	P0C854	216 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030		P0C879	139 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	MAL	P21145	153 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	ZFP36	P26651	326 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FOXA3	P55318	350 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	FBXW4	P57775	412 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	TMEM258	P61165	79 aa		4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	HSPE1	P61604	102 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-233	ENST00000635030	HERVK_113	P63121	156 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms