RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TMEM41BQ5BJD5 291 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 GCSAMLQ5JQS6 135 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 SSX7Q7RTT5 188 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 KCNIP2Q9NS61 270 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 U3KQK5 164 aa9.61□□□□□ -0.87
PNKP-217ENST00000625216 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
PNKP-217ENST00000625216 FCGR2BP31994 310 aaPredicted RBP9.6□□□□□ -0.87
PNKP-217ENST00000625216 NPBWR1P48145 328 aa9.6□□□□□ -0.87
PNKP-217ENST00000625216 RAB5CP51148 216 aa9.6□□□□□ -0.87
PNKP-217ENST00000625216 RAB31Q13636 194 aa9.6□□□□□ -0.87
PNKP-217ENST00000625216 Q56UQ5 140 aa9.6□□□□□ -0.87
PNKP-217ENST00000625216 TENM3Q9P273 2699 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 HUWE1Q7Z6Z7 4374 aaKnown RBP9.59□□□□□ -0.87
PNKP-217ENST00000625216 BMPR1BO00238 502 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 GNG7O60262 68 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 EIF3GO75821 320 aaKnown RBP eCLIP9.59□□□□□ -0.87
PNKP-217ENST00000625216 CSN3P07498 182 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 M6PRP20645 277 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 GPR183P32249 361 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 RAB14P61106 215 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 ACOT6Q3I5F7 207 aaPredicted RBP9.59□□□□□ -0.87
PNKP-217ENST00000625216 PXDC1Q5TGL8 231 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 FAM122CQ6P4D5 195 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 OR2K2Q8NGT1 345 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 LRRC20Q8TCA0 184 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 SAT2Q96F10 170 aaPredicted RBP9.59□□□□□ -0.87
PNKP-217ENST00000625216 ASCL2Q99929 193 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
PNKP-217ENST00000625216 OR2T8A6NH00 312 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 A8MZ25 164 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 TEX46H3BTG2 121 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 GGCTO75223 188 aaKnown RBP9.58□□□□□ -0.88
PNKP-217ENST00000625216 ADMP35318 185 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 SELENOTP62341 195 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 CLEC19AQ6UXS0 136 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 DPPA3Q6W0C5 159 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 Q8N1Y9 231 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 RPP25LQ8N5L8 163 aaKnown RBP9.58□□□□□ -0.88
PNKP-217ENST00000625216 OR10G4Q8NGN3 311 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 OR10G9Q8NGN4 311 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 OR10G7Q8NGN6 311 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 TXN2Q99757 166 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 CHRDL1Q9BU40 450 aa9.58□□□□□ -0.88
PNKP-217ENST00000625216 TRAV30A0A087WSZ9 112 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 TRBV7-1A0A0A6YYK4 115 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 LINC00862A6NCI5 91 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 TOMM40O96008 361 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 MBP02144 154 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 PSG1P11464 419 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 GPHB5Q86YW7 130 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 DOK5Q9P104 306 aa9.57□□□□□ -0.88
PNKP-217ENST00000625216 CTXND1A0A1B0GTU2 59 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 LGALS9O00182 355 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 TGOLN2O43493 480 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 CTSGP08311 255 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 OR5G3P0C626 314 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 CDC34P49427 236 aaPredicted RBP9.56□□□□□ -0.88
PNKP-217ENST00000625216 PLP1P60201 277 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
PNKP-217ENST00000625216 FAM106AQ4KMX7 169 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
PNKP-217ENST00000625216 A0A1B0GV50 99 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 MAP1LC3B2A6NCE7 125 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 HMGB3O15347 200 aaKnown RBP9.55□□□□□ -0.88
PNKP-217ENST00000625216 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 OR2C1O95371 312 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 CLEC3BP05452 202 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 H2AFB1P0C5Y9 115 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 RD3LP0DJH9 198 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 IGHV4-30-4P0DP06 118 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 LYZP61626 148 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 MORN5Q5VZ52 161 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 GTSCR1Q86UQ5 136 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 MBD3L1Q8WWY6 194 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 RAB24Q969Q5 203 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
PNKP-217ENST00000625216 MAP1LC3BQ9GZQ8 125 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 C19orf73Q9NVV2 129 aa9.55□□□□□ -0.88
PNKP-217ENST00000625216 TECRQ9NZ01 308 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms