RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CSN3P07498 182 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 FBLN7Q53RD9 439 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 MIR17HGQ75NE6 70 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 HAPLN4Q86UW8 402 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 SLC25A39Q9BZJ4 359 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-229ENST00000622668 FAM90A9PA6NNJ1 464 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 UBE2L6O14933 153 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 NDUFB4O95168 129 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 Q6ZS49 121 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 LHFPL1Q86WI0 220 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 FAM210BQ96KR6 192 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 SCRT1Q9BWW7 348 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 PTPRBP23467 1997 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 TRAV34A0A0B4J273 112 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 C1orf196B1AJZ1 125 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 G3V3Q6 166 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 LGALS1P09382 135 aaKnown RBP7.21□□□□□ -1.25
HDAC9-229ENST00000622668 PYYP10082 97 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 FOXE3Q13461 319 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 USF2Q15853 346 aaPredicted RBP7.21□□□□□ -1.25
HDAC9-229ENST00000622668 SAPCD1Q5SSQ6 148 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 C1orf159Q96HA4 380 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF98A6NK75 572 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 GCGP01275 180 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 FOLR2P14207 255 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 RAB5BP61020 215 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 BSXQ3C1V8 233 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 KRTAP27-1Q3LI81 207 aa7.21□□□□□ -1.25
HDAC9-229ENST00000622668 SRRM4A7MD48 611 aaKnown RBP7.21□□□□□ -1.26
HDAC9-229ENST00000622668 A8MXK9 166 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 CA1P00915 261 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-229ENST00000622668 GCHFRP30047 84 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 APOC4P55056 127 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 TWIST1Q15672 202 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 TXN2Q99757 166 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 COL4A2P08572 1712 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 IGHV7-81A0A0B4J1V7 117 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 RNASE2P10153 161 aaKnown RBP7.21□□□□□ -1.26
HDAC9-229ENST00000622668 CD28P10747 220 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 ID3Q02535 119 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF415Q09FC8 603 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 FA2HQ7L5A8 372 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 VN1R17PQ8TDU5 208 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 NAT8BQ9UHF3 227 aa7.21□□□□□ -1.26
HDAC9-229ENST00000622668 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
HDAC9-229ENST00000622668 PDE6DO43924 150 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 IGLV1-47P01700 117 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 HILS1P60008 231 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 MRPL54Q6P161 138 aaKnown RBP7.2□□□□□ -1.26
HDAC9-229ENST00000622668 TOMM20LQ6UXN7 152 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 Q6YL49 198 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 SRSF8Q9BRL6 282 aaKnown RBP7.2□□□□□ -1.26
HDAC9-229ENST00000622668 RIGQ13278 110 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF841Q6ZN19 808 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 Q8N9W7 124 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 ASCL2Q99929 193 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 SH3BGRL3Q9H299 93 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 NRN1Q9NPD7 142 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 Q6ZSV7 163 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 C5orf56Q8N8D9 126 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 NEU1Q99519 415 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 Q9H3A6 140 aa7.2□□□□□ -1.26
HDAC9-229ENST00000622668 MRPL27Q9P0M9 148 aaKnown RBP7.2□□□□□ -1.26
HDAC9-229ENST00000622668 MUC21A0A0G2JKD1 596 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 MUC21A0A140T8X8 626 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 KLK15Q9H2R5 256 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 GRIFINA4D1Z8 144 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 Q6ZRM9 215 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 SLC35B3Q9H1N7 401 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 A0A0G2JRQ6 117 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 IGHV3-53P01767 116 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 MYCNOSP40205 109 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 ASIPP42127 132 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 WT1-ASQ06250 92 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 TMPRSS5Q9H3S3 457 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 KMT2EQ8IZD2 1858 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 NCKAP5O14513 1909 aa7.19□□□□□ -1.26
HDAC9-229ENST00000622668 TRAV5A0A0B4J249 113 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 A8MWL6 223 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 TMEM50AO95807 157 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 LEPP41159 167 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 SLC7A5P1Q8MH63 180 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF705FA8MVS1 300 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-229ENST00000622668 AVPP01185 164 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF705DP0CH99 300 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-229ENST00000622668 ZNF705BP0CI00 300 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-229ENST00000622668 MEF2BQ02080 365 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-229ENST00000622668 TMEM183BQ1AE95 376 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 TMEM183AQ8IXX5 376 aa7.18□□□□□ -1.26
HDAC9-229ENST00000622668 CYB561D1Q8N8Q1 229 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms