RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 YPEL3P61236 119 aaPredicted RBP12.27□□□□□ -0.44
CBWD3-216ENST00000621396 SLC35B1P78383 322 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 TCTEX1D4Q5JR98 221 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 FAM167A-AS1Q96KT0 104 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 TXN2Q99757 166 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 C20orf24Q9BUV8 137 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 SLC25A39Q9BZJ4 359 aaPredicted RBP12.27□□□□□ -0.44
CBWD3-216ENST00000621396 H3BUA1 57 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 PPT1P50897 306 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 DEFB136Q30KP8 78 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 UNQ9165/PRO28630Q6UXU0 137 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 OR1L4Q8NGR5 311 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 PFDN5Q99471 154 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
CBWD3-216ENST00000621396 ELOA3CA0A087WX78 387 aaPredicted RBP12.26□□□□□ -0.45
CBWD3-216ENST00000621396 PAGE4O60829 102 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 CRLF1O75462 422 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 TSPAN9O75954 239 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
CBWD3-216ENST00000621396 TENM1Q9UKZ4 2725 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 C8orf88P0DMB2 117 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 DUX3Q96PT4 197 aa12.26□□□□□ -0.45
CBWD3-216ENST00000621396 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 CXorf1O96002 111 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 GCHFRP30047 84 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 RPL15P61313 204 aaKnown RBP12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ICAM4Q14773 271 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ZNF343Q6P1L6 599 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ZNF320A2RRD8 509 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 BMPR1BO00238 502 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 APOHP02749 345 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-216ENST00000621396 CD5P06127 495 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 PLP1P60201 277 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ZNF600Q6ZNG1 722 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
CBWD3-216ENST00000621396 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.24□□□□□ -0.45
CBWD3-216ENST00000621396 FABP1P07148 127 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 ADCYAP1P18509 176 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 EIF4E3Q8N5X7 224 aaKnown RBP12.24□□□□□ -0.45
CBWD3-216ENST00000621396 BLNKQ8WV28 456 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 ATRQ13535 2644 aa12.24□□□□□ -0.45
CBWD3-216ENST00000621396 TCF21O43680 179 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 BRI3O95415 125 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 BCL2P10415 239 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 EDN2P20800 178 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 ATP5G3P48201 142 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 FOXE3Q13461 319 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 C19orf24Q9BVV8 132 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 YTHDF2Q9Y5A9 579 aaKnown RBP12.23□□□□□ -0.45
CBWD3-216ENST00000621396 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 SFTA3P0C7M3 94 aa12.23□□□□□ -0.45
CBWD3-216ENST00000621396 UBE2L3P68036 154 aaKnown RBP12.23□□□□□ -0.45
CBWD3-216ENST00000621396 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 A0A1W2PRX2 142 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 ELANEP08246 267 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 TAS2R45P59539 299 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 C17orf77Q96MU5 243 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 PAXXQ9BUH6 204 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
CBWD3-216ENST00000621396 OR51M1Q9H341 326 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 PEF1Q9UBV8 284 aaKnown RBP12.22□□□□□ -0.45
CBWD3-216ENST00000621396 TMEM218A2RU14 115 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 ZNF98A6NK75 572 aa12.22□□□□□ -0.45
CBWD3-216ENST00000621396 SCGB2A1O75556 95 aa12.21□□□□□ -0.45
CBWD3-216ENST00000621396 CD28P10747 220 aa12.21□□□□□ -0.45
CBWD3-216ENST00000621396 CD81P60033 236 aa12.21□□□□□ -0.45
CBWD3-216ENST00000621396 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
CBWD3-216ENST00000621396 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
CBWD3-216ENST00000621396 GAR1Q9NY12 217 aaKnown RBP12.21□□□□□ -0.45
CBWD3-216ENST00000621396 NUDT19A8MXV4 375 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 H3BQ15 152 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 PEA15Q15121 130 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 OR4F5Q8NH21 305 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 FXYD5Q96DB9 178 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 OR4F4Q96R69 305 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 SHANK2-AS3Q9BTD1 123 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 RABAC1Q9UI14 185 aa12.21□□□□□ -0.46
CBWD3-216ENST00000621396 FBN1P35555 2871 aaKnown RBP12.2□□□□□ -0.46
CBWD3-216ENST00000621396 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 A0A087WW49 117 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 H3BRN7 92 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 PSMB3P49720 205 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
CBWD3-216ENST00000621396 ZNF506Q5JVG8 444 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 C11orf94C9JXX5 98 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 F8W036 122 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 GP9P14770 177 aa12.2□□□□□ -0.46
CBWD3-216ENST00000621396 RANP62826 216 aaKnown RBP12.2□□□□□ -0.46
CBWD3-216ENST00000621396 MEF2BQ02080 365 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms