RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SLC25A2Q9BXI2 301 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 C21orf62Q9NYP8 219 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 UFC1Q9Y3C8 167 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 SOX21Q9Y651 276 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 NCKAP5O14513 1909 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 MUC6Q6W4X9 2439 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 J3KRW8 73 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 PRSS1P07477 247 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 CNTFRP26992 372 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 CKS2P33552 79 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 KLF17Q5JT82 389 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 TMEM136Q6ZRR5 245 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 FNDC4Q9H6D8 234 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 RABAC1Q9UI14 185 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 F11RQ9Y624 299 aaKnown RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 BMPR1BO00238 502 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 NUPR1O60356 82 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 LY6HO94772 140 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 COL8A2P25067 703 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 UCNP55089 124 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 NUTF2P61970 127 aaKnown RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 NIT1Q86X76 327 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 SLC25A39Q9BZJ4 359 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 CLEC5AQ9NY25 188 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 CBY1Q9Y3M2 126 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 CGB1A6NKQ9 187 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 BMI1P35226 326 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 TFPI2P48307 235 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 SSBP2P81877 361 aaPredicted RBP7.01□□□□□ -1.29
LIG4-204ENST00000611712 SLC25A34Q6PIV7 304 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 ZNF738Q8NE65 137 aa7.01□□□□□ -1.29
LIG4-204ENST00000611712 A0A1W2PS18 150 aa7□□□□□ -1.29
LIG4-204ENST00000611712 FCER1GP30273 86 aa7□□□□□ -1.29
LIG4-204ENST00000611712 CR1LQ2VPA4 569 aa7□□□□□ -1.29
LIG4-204ENST00000611712 UNQ6494/PRO21346Q6UXR6 183 aa7□□□□□ -1.29
LIG4-204ENST00000611712 ARPC1AQ92747 370 aa7□□□□□ -1.29
LIG4-204ENST00000611712 FBXL7Q9UJT9 491 aa7□□□□□ -1.29
LIG4-204ENST00000611712 LAMTOR2Q9Y2Q5 125 aa7□□□□□ -1.29
LIG4-204ENST00000611712 KMT2EQ8IZD2 1858 aa7□□□□□ -1.29
LIG4-204ENST00000611712 IGKV3-7A0A075B6H7 116 aa7□□□□□ -1.29
LIG4-204ENST00000611712 A6NNC1 897 aa7□□□□□ -1.29
LIG4-204ENST00000611712 F2Z2F3 143 aa7□□□□□ -1.29
LIG4-204ENST00000611712 CEACAM4O75871 244 aa7□□□□□ -1.29
LIG4-204ENST00000611712 PSG9Q00887 426 aa7□□□□□ -1.29
LIG4-204ENST00000611712 ATP5L2Q7Z4Y8 100 aa7□□□□□ -1.29
LIG4-204ENST00000611712 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
LIG4-204ENST00000611712 SNHG12Q9BXW3 62 aa7□□□□□ -1.29
LIG4-204ENST00000611712 PSG8Q9UQ74 426 aa7□□□□□ -1.29
LIG4-204ENST00000611712 PLXNB1O43157 2135 aa7□□□□□ -1.29
LIG4-204ENST00000611712 IGKV1OR2-108A0A075B7D4 117 aa7□□□□□ -1.29
LIG4-204ENST00000611712 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
LIG4-204ENST00000611712 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
LIG4-204ENST00000611712 PDLIM4P50479 330 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 PVRIGQ6DKI7 326 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 RASL11AQ6T310 242 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 TNRC6AQ8NDV7 1962 aaKnown RBP6.99□□□□□ -1.29
LIG4-204ENST00000611712 A0A1B0GWJ7 208 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 LINC00614P0C842 121 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 CGB3P0DN86 165 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 CGB7P0DN87 165 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 SAPCD1Q5SSQ6 148 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 PMCHL2Q9BQD1 86 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 IGHV3-49A0A0A0MS15 119 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 OR2T8A6NH00 312 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 SLAQ13239 276 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 KLRD1Q13241 179 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 LINC00311Q8N616 119 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 VPS25Q9BRG1 176 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 CTSZQ9UBR2 303 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 TLN1Q9Y490 2541 aaKnown RBP6.99□□□□□ -1.29
LIG4-204ENST00000611712 DNAH14Q0VDD8 3507 aa6.99□□□□□ -1.29
LIG4-204ENST00000611712 M0QZ24 198 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 FAM168AQ92567 244 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 ZFP30Q9Y2G7 519 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 HCFC1P51610 2035 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 KLRB1Q12918 225 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 SPG11Q96JI7 2443 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 IGHV3-66A0A0C4DH42 116 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 GPR183P32249 361 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 TPTE2P1Q5T6R2 138 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 TMEM78Q5T7P6 136 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 ASCL2Q99929 193 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 C20orf144Q9BQM9 153 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
LIG4-204ENST00000611712 SZT2Q5T011 3432 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 SMIM27A0A1W2PRY6 76 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 TOMM40O96008 361 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 FRMD6-AS1P0C7T7 363 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 DMRTA1Q5VZB9 504 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 C12orf54Q6X4T0 127 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms