RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 PLA2G10O15496 165 aa13.2□□□□□ -0.3
CCDC12-213ENST00000605875 GIG44P09565 113 aaPredicted RBP13.2□□□□□ -0.3
CCDC12-213ENST00000605875 SPP1P10451 314 aa13.2□□□□□ -0.3
CCDC12-213ENST00000605875 ID3Q02535 119 aa13.2□□□□□ -0.3
CCDC12-213ENST00000605875 PFDN2Q9UHV9 154 aa13.2□□□□□ -0.3
CCDC12-213ENST00000605875 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 IGLL5B9A064 214 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-213ENST00000605875 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-213ENST00000605875 GSG1LQ6UXU4 331 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 PSENENQ9NZ42 101 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 APLNQ9ULZ1 77 aa13.19□□□□□ -0.3
CCDC12-213ENST00000605875 CCNKO75909 580 aa13.18□□□□□ -0.3
CCDC12-213ENST00000605875 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
CCDC12-213ENST00000605875 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
CCDC12-213ENST00000605875 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
CCDC12-213ENST00000605875 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
CCDC12-213ENST00000605875 HECTD4Q9Y4D8 3996 aa13.18□□□□□ -0.3
CCDC12-213ENST00000605875 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 C11orf94C9JXX5 98 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 CCSO14618 274 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 DEFB1P60022 68 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 TMEM41BQ5BJD5 291 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 C1orf194Q5T5A4 169 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
CCDC12-213ENST00000605875 Q8NAQ8 132 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 BPIFCQ8NFQ6 507 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
CCDC12-213ENST00000605875 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
CCDC12-213ENST00000605875 RCL1Q9Y2P8 373 aaKnown RBP13.17□□□□□ -0.3
CCDC12-213ENST00000605875 SOCS3O14543 225 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 RRAS2P62070 204 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-213ENST00000605875 CNPY1Q3B7I2 92 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-213ENST00000605875 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 CCDC32Q9BV29 185 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 SLC25A32Q9H2D1 315 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 SLC25A22Q9H936 323 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 GSKIPQ9P0R6 139 aa13.16□□□□□ -0.3
CCDC12-213ENST00000605875 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-213ENST00000605875 TCRBP04435 133 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 METTL15P1P0C7V9 234 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 HLA-DRB4P13762 266 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 ORM2P19652 201 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 PSMB3P49720 205 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 PAX9P55771 341 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 GDF5OSQ5U4N7 250 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 TMEM14EPQ6UXP3 125 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 SEC22CQ9BRL7 303 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 DOK5Q9P104 306 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.3
CCDC12-213ENST00000605875 KIAA1109Q2LD37 5005 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 H3BMM0 161 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 RBMY1A1P0DJD3 496 aaKnown RBP13.14□□□□□ -0.31
CCDC12-213ENST00000605875 RBMY1CP0DJD4 496 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 RBMY1FQ15415 496 aaKnown RBP13.14□□□□□ -0.31
CCDC12-213ENST00000605875 CYP2G1PQ6ZSU1 146 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 TMEM144Q7Z5S9 345 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
CCDC12-213ENST00000605875 ZNF705EA8MWA4 302 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-213ENST00000605875 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 IGKV3-20P01619 116 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-213ENST00000605875 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 ID1P41134 155 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 DLK1P80370 383 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 CSNK1G2-AS1Q8NCQ2 148 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 SCRT1Q9BWW7 348 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 TBC1D24Q9ULP9 559 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 X6R8D5 127 aa13.13□□□□□ -0.31
CCDC12-213ENST00000605875 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 TSC22D2O75157 780 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 MIFP14174 115 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 GALR1P47211 349 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 FOXI2Q6ZQN5 318 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 ZNF431Q8TF32 576 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-213ENST00000605875 SAV1Q9H4B6 383 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-213ENST00000605875 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
CCDC12-213ENST00000605875 H3BRN7 92 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 ISLRO14498 428 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 IL5P05113 134 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 LINC00869P0C866 280 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
CCDC12-213ENST00000605875 SLC38A11Q08AI6 406 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 ZNF846Q147U1 533 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 C1QTNF4Q9BXJ3 329 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 LSM5Q9Y4Y9 91 aaKnown RBP13.11□□□□□ -0.31
CCDC12-213ENST00000605875 PCLOQ9Y6V0 5065 aa13.11□□□□□ -0.31
CCDC12-213ENST00000605875 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
CCDC12-213ENST00000605875 TRAV10A0A0B4J240 114 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms