RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 WDR12Q9GZL7 423 aaKnown RBP18.92■□□□□ 0.62
PNKP-216ENST00000601816 PSENENQ9NZ42 101 aa18.92■□□□□ 0.62
PNKP-216ENST00000601816 HLA-DRB4P13762 266 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 CSNK1G2-AS1Q8NCQ2 148 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 BPIFCQ8NFQ6 507 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 C1QTNF4Q9BXJ3 329 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 TBC1D24Q9ULP9 559 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 HLA-DRB4X5D2U9 266 aa18.91■□□□□ 0.62
PNKP-216ENST00000601816 PSMB3P49720 205 aa18.9■□□□□ 0.62
PNKP-216ENST00000601816 SLC45A2Q9UMX9 530 aa18.9■□□□□ 0.62
PNKP-216ENST00000601816 X6R8D5 127 aa18.9■□□□□ 0.62
PNKP-216ENST00000601816 SMCO3A2RU48 225 aa18.89■□□□□ 0.61
PNKP-216ENST00000601816 RBMY1A1P0DJD3 496 aaKnown RBP18.89■□□□□ 0.61
PNKP-216ENST00000601816 RBMY1CP0DJD4 496 aa18.89■□□□□ 0.61
PNKP-216ENST00000601816 RBMY1FQ15415 496 aaKnown RBP18.89■□□□□ 0.61
PNKP-216ENST00000601816 IAH1Q2TAA2 248 aaPredicted RBP18.89■□□□□ 0.61
PNKP-216ENST00000601816 TMEM144Q7Z5S9 345 aa18.89■□□□□ 0.61
PNKP-216ENST00000601816 SMIM8Q96KF7 97 aa18.89■□□□□ 0.61
PNKP-216ENST00000601816 C20orf85Q9H1P6 137 aa18.89■□□□□ 0.61
PNKP-216ENST00000601816 SOCS3O14543 225 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 SCGB1D2O95969 90 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 ORM2P19652 201 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 GATA2P23769 480 aaPredicted RBP18.88■□□□□ 0.61
PNKP-216ENST00000601816 SAMD13Q5VXD3 122 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 MITD1Q8WV92 249 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 TMEM147Q9BVK8 224 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 HRH4Q9H3N8 390 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 XCL2Q9UBD3 114 aa18.88■□□□□ 0.61
PNKP-216ENST00000601816 PLA2G10O15496 165 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 LYRM1O43325 122 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 S100A7P31151 101 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 GALR1P47211 349 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 GDF5OSQ5U4N7 250 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 TMEM182Q6ZP80 229 aaPredicted RBP18.87■□□□□ 0.61
PNKP-216ENST00000601816 FOXI2Q6ZQN5 318 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 SLC25A32Q9H2D1 315 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 SAV1Q9H4B6 383 aaPredicted RBP18.87■□□□□ 0.61
PNKP-216ENST00000601816 SLC25A22Q9H936 323 aa18.87■□□□□ 0.61
PNKP-216ENST00000601816 ZNF98A6NK75 572 aa18.86■□□□□ 0.61
PNKP-216ENST00000601816 ISLRO14498 428 aa18.86■□□□□ 0.61
PNKP-216ENST00000601816 MEOX2P50222 304 aa18.86■□□□□ 0.61
PNKP-216ENST00000601816 DEFB1P60022 68 aa18.86■□□□□ 0.61
PNKP-216ENST00000601816 ZBTB8BQ8NAP8 495 aaPredicted RBP18.86■□□□□ 0.61
PNKP-216ENST00000601816 OR1B1Q8NGR6 318 aa18.86■□□□□ 0.61
PNKP-216ENST00000601816 PMS2P5A8MQ11 134 aa18.85■□□□□ 0.61
PNKP-216ENST00000601816 IGKV3-20P01619 116 aa18.85■□□□□ 0.61
PNKP-216ENST00000601816 PAX9P55771 341 aa18.85■□□□□ 0.61
PNKP-216ENST00000601816 CYP2G1PQ6ZSU1 146 aa18.85■□□□□ 0.61
PNKP-216ENST00000601816 GSKIPQ9P0R6 139 aa18.85■□□□□ 0.61
PNKP-216ENST00000601816 IL5P05113 134 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 METTL15P1P0C7V9 234 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 DLK1P80370 383 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 TMEM14EPQ6UXP3 125 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 GSG1LQ6UXU4 331 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 C2CD4CQ8TF44 421 aa18.84■□□□□ 0.61
PNKP-216ENST00000601816 ELOA3CA0A087WX78 387 aaPredicted RBP18.83■□□□□ 0.6
PNKP-216ENST00000601816 CCNKO75909 580 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 TAS2R30P59541 319 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 RRAS2P62070 204 aaPredicted RBP18.83■□□□□ 0.6
PNKP-216ENST00000601816 SPATA31B1PQ5VZV4 182 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 C16orf92Q96LL3 132 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 GPR82Q96P67 336 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 RSG1Q9BU20 258 aa18.83■□□□□ 0.6
PNKP-216ENST00000601816 C11orf94C9JXX5 98 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 TSC22D2O75157 780 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 TCRBP04435 133 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 HLA-DMBP28068 263 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 EBLN2Q6P2I7 272 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 OR10P1Q8NGE3 313 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 OR4B1Q8NGF8 309 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 CLUHP3Q96NS8 147 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 DOK5Q9P104 306 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 MGAT4CQ9UBM8 478 aa18.82■□□□□ 0.6
PNKP-216ENST00000601816 RCL1Q9Y2P8 373 aaKnown RBP18.82■□□□□ 0.6
PNKP-216ENST00000601816 EPPK1P58107 5090 aaKnown RBP18.82■□□□□ 0.6
PNKP-216ENST00000601816 TRAV6A0A075B6T7 132 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 FXYD7P58549 80 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 RAP2BP61225 183 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 SELENOTP62341 195 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 CCDC32Q9BV29 185 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 SCRT1Q9BWW7 348 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 RPRMQ9NS64 109 aa18.81■□□□□ 0.6
PNKP-216ENST00000601816 FNDC10F2Z333 226 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 H3BRN7 92 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 CCSO14618 274 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 LINC00869P0C866 280 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 ZNF846Q147U1 533 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 LGALS9CQ6DKI2 356 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 NPVFQ9HCQ7 196 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 NUDT15Q9NV35 164 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 HIGD1AQ9Y241 93 aa18.8■□□□□ 0.6
PNKP-216ENST00000601816 F6UB75 175 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 HYPMO75409 117 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 MBPP02686 304 aaPredicted RBP18.79■□□□□ 0.6
PNKP-216ENST00000601816 TCTAP57738 103 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 C20orf173Q96LM9 149 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 SHANK2-AS3Q9BTD1 123 aa18.79■□□□□ 0.6
PNKP-216ENST00000601816 SLC25A39Q9BZJ4 359 aaPredicted RBP18.79■□□□□ 0.6
PNKP-216ENST00000601816 PLP1P60201 277 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms