RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 CAV2P51636 162 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 OR2B8PP59922 312 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 RPS11P62280 158 aaKnown RBP eCLIP2.78□□□□□ -1.96
VRK3-222ENST00000601324 SNRPGP62308 76 aaKnown RBP2.78□□□□□ -1.96
VRK3-222ENST00000601324 RPL30P62888 115 aaKnown RBP2.78□□□□□ -1.96
VRK3-222ENST00000601324 HLA-DRB3P79483 266 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 QRFPP83859 136 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 YIF1BQ5BJH7 314 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 TMEM69Q5SWH9 247 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 UBE2UQ5VVX9 321 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 XAF1Q6GPH4 301 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 SLC25A24Q6NUK1 477 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 GLIPR1L1Q6UWM5 242 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 FAM220AQ7Z4H9 259 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 C6orf201Q7Z4U5 140 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 VKORC1L1Q8N0U8 176 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 C1orf158Q8N1D5 194 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 SYS1Q8N2H4 156 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 DNAJC9Q8WXX5 260 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 ATP6V1G3Q96LB4 118 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 HDHD3Q9BSH5 251 aaPredicted RBP2.78□□□□□ -1.96
VRK3-222ENST00000601324 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 OR51E2Q9H255 320 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 ABRACLQ9P1F3 81 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 XCL2Q9UBD3 114 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 IGHV3OR16-13A0A075B7E8 117 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 IGHV3-74A0A0B4J1X5 117 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 J3QLW9 94 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 RS1O15537 224 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 ZNF861PO60384 105 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 CST1P01037 141 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 CD5P06127 495 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 RPSAP08865 295 aaKnown RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 HTN3P15516 51 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 CELP19835 753 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 GNRHRP30968 328 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 FGF9P31371 208 aaPredicted RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 PPT1P50897 306 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 CCL18P55774 89 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 ARFRP1Q13795 201 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 ARL6IP1Q15041 203 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 RTL8BQ17RB0 113 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 ESRGQ1W209 222 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 TRIM16LQ309B1 348 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 KDM4DQ6B0I6 523 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 CDH26Q8IXH8 852 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 CBR4Q8N4T8 237 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 ZNF709Q8N972 641 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 OR52I1Q8NGK6 324 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 OR5AK2Q8NH90 309 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 NRBF2Q96F24 287 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 MYCBPQ99417 103 aaPredicted RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 THTPAQ9BU02 230 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 C20orf24Q9BUV8 137 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 OR2D2Q9H210 308 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 MRPS16Q9Y3D3 137 aaKnown RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 AK6Q9Y3D8 172 aaKnown RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 YTHDF2Q9Y5A9 579 aaKnown RBP2.77□□□□□ -1.97
VRK3-222ENST00000601324 PUS1Q9Y606 427 aaKnown RBP eCLIP2.77□□□□□ -1.97
VRK3-222ENST00000601324 RFNGQ9Y644 331 aa2.77□□□□□ -1.97
VRK3-222ENST00000601324 TRBV6-7A0A0A0MS04 114 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 TRAV14DV4A0A0A6YYC5 116 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 DAPL1A0PJW8 107 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 HELTA6NFD8 242 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 PANO1I0J062 215 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 CREBL2O60519 120 aaPredicted RBP2.76□□□□□ -1.97
VRK3-222ENST00000601324 SNAPINO95295 136 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 DHFRP00374 187 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 IFNA5P01569 189 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ZNF688P0C7X2 276 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 SRMP19623 302 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 CALRP27797 417 aaKnown RBP2.76□□□□□ -1.97
VRK3-222ENST00000601324 P2RY1P47900 373 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 PSMD7P51665 324 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 EMP1P54849 157 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 UNC119Q13432 240 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 TPBGQ13641 420 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ACTL10Q5JWF8 245 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 OR2G6Q5TZ20 316 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 TTC23Q5W5X9 447 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 OR10K2Q6IF99 312 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 KCNIP4Q6PIL6 250 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ZNF773Q6PK81 442 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ACOT7LQ6ZUV0 252 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ACBD7Q8N6N7 88 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 GDPD1Q8N9F7 314 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 DUSP18Q8NEJ0 188 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 OR8J1Q8NGP2 316 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 CANT1Q8WVQ1 401 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 DYDC1Q8WWB3 177 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 CMTM5Q96DZ9 223 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 TMEM101Q96IK0 257 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 ADTRPQ96IZ2 230 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 PGLYRP4Q96LB8 373 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms