RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
HIF3A-218ENST00000600383 PNRC1Q12796 327 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-218ENST00000600383 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
HIF3A-218ENST00000600383 IL17RELQ6ZVW7 336 aa11.83□□□□□ -0.52
HIF3A-218ENST00000600383 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
HIF3A-218ENST00000600383 FXYD5Q96DB9 178 aa11.83□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-218ENST00000600383 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 FSHBP01225 129 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 TRGV3P03979 118 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 IGF1P05019 195 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 ADMP35318 185 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 TXN2Q99757 166 aa11.82□□□□□ -0.52
HIF3A-218ENST00000600383 SONP18583 2426 aaKnown RBP11.81□□□□□ -0.52
HIF3A-218ENST00000600383 A0A1W2PRE2 83 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 NBEAP1P0C6P0 100 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-218ENST00000600383 WI2-2373I1.2A0A1W2PRP0 233 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
HIF3A-218ENST00000600383 OR2C1O95371 312 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
HIF3A-218ENST00000600383 CTAG1AP78358 180 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 EEF1AKMT3Q96AZ1 226 aa11.81□□□□□ -0.52
HIF3A-218ENST00000600383 AP4M1O00189 453 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 HNF1AP20823 631 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 TPPP2P59282 170 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 FLI1Q01543 452 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-218ENST00000600383 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 C19orf54Q5BKX5 351 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 Q6YL49 198 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 CCDC140Q96MF4 163 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 ACANP16112 2415 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 B4DEV8 164 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-218ENST00000600383 PF4V1P10720 104 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-218ENST00000600383 FAM24BQ8N5W8 94 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 OR5R1Q8NH85 324 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 DUX5Q96PT3 197 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 ELOVL1Q9BW60 279 aa11.8□□□□□ -0.52
HIF3A-218ENST00000600383 GP9P14770 177 aa11.79□□□□□ -0.52
HIF3A-218ENST00000600383 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
HIF3A-218ENST00000600383 RPL35P42766 123 aaKnown RBP11.79□□□□□ -0.52
HIF3A-218ENST00000600383 RNF212Q495C1 297 aa11.79□□□□□ -0.52
HIF3A-218ENST00000600383 LCNL1Q6ZST4 164 aa11.79□□□□□ -0.52
HIF3A-218ENST00000600383 C9orf139Q6ZV77 190 aa11.79□□□□□ -0.52
HIF3A-218ENST00000600383 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 HELTA6NFD8 242 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 COLCA2A8K830 154 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF329Q86UD4 541 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 FOXC2Q99958 501 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 VPREB3Q9UKI3 123 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 A0A087WWC5 75 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 PGPA6NDG6 321 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 PPP5D1E7EU14 171 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 H3BRN7 92 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 BPIFA4PQ86YQ2 179 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
HIF3A-218ENST00000600383 FAM223BA6NKX1 122 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 ZNF343Q6P1L6 599 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 LINC01551Q86U37 167 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 C15orf54Q8N8G6 183 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 TUBA4BQ9H853 241 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 GAR1Q9NY12 217 aaKnown RBP11.77□□□□□ -0.52
HIF3A-218ENST00000600383 RPH3ALQ9UNE2 315 aa11.77□□□□□ -0.52
HIF3A-218ENST00000600383 TGOLN2O43493 480 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 IGHV3-11P01762 117 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 OCC1Q8TAD7 63 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 LINC00479Q96M42 142 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 ZNF586Q9NXT0 402 aa11.77□□□□□ -0.53
HIF3A-218ENST00000600383 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
HIF3A-218ENST00000600383 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
HIF3A-218ENST00000600383 GNG5P63218 68 aa11.76□□□□□ -0.53
HIF3A-218ENST00000600383 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
HIF3A-218ENST00000600383 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
HIF3A-218ENST00000600383 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
HIF3A-218ENST00000600383 BMPR1BO00238 502 aa11.75□□□□□ -0.53
HIF3A-218ENST00000600383 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
HIF3A-218ENST00000600383 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
HIF3A-218ENST00000600383 SIGLECL1Q8N7X8 197 aa11.75□□□□□ -0.53
HIF3A-218ENST00000600383 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
HIF3A-218ENST00000600383 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
HIF3A-218ENST00000600383 CLDN34H7C241 214 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms