RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 SPCS2Q15005 226 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 P2RY14Q15391 338 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 RAB11BQ15907 218 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 SSX1Q16384 188 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 ZIK1Q3SY52 487 aaPredicted RBP2.7□□□□□ -1.98
HERC3-213ENST00000598772 TOR2AQ5JU69 321 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 SAMD13Q5VXD3 122 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 C12orf73Q69YU5 71 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 SDIM1Q6ZPB5 146 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 NOXA1Q86UR1 476 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 ZNF555Q8NEP9 628 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 ST6GAL2Q96JF0 529 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 MYCBPQ99417 103 aaPredicted RBP2.7□□□□□ -1.98
HERC3-213ENST00000598772 URM1Q9BTM9 101 aaKnown RBP2.7□□□□□ -1.98
HERC3-213ENST00000598772 PARD6GQ9BYG4 376 aaPredicted RBP2.7□□□□□ -1.98
HERC3-213ENST00000598772 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 KLF12Q9Y4X4 402 aa2.7□□□□□ -1.98
HERC3-213ENST00000598772 USH2AO75445 5202 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 TRAV30A0A087WSZ9 112 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 PNMA8CA0A1B0GUJ8 204 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 A8MTW9 85 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 SOCS3O14543 225 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 IGLV2-14P01704 120 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 ORM1P02763 201 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 OR10J1P30954 320 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 LPAR6P43657 344 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 CBX5P45973 191 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 DAPP51397 102 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 SUB1P53999 127 aaKnown RBP eCLIP2.69□□□□□ -1.98
HERC3-213ENST00000598772 TMEM50BP56557 158 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 SRSF9Q13242 221 aaKnown RBP eCLIP2.69□□□□□ -1.98
HERC3-213ENST00000598772 TMED1Q13445 227 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 VWC2Q2TAL6 325 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 MAJINQ3KP22 176 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 AADACL3Q5VUY0 350 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 RPL22L1Q6P5R6 122 aaKnown RBP2.69□□□□□ -1.98
HERC3-213ENST00000598772 CROCCP2Q86T23 111 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 CDH26Q8IXH8 852 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 ZBTB34Q8NCN2 500 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 OR1S2Q8NGQ3 325 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 OR4A16Q8NH70 328 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 UBE2WQ96B02 151 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 SEC22AQ96IW7 307 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 C2orf50Q96LR7 162 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 LPAR5Q9H1C0 372 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 MAGIXQ9H6Y5 334 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 PRNDQ9UKY0 176 aa2.69□□□□□ -1.98
HERC3-213ENST00000598772 IGKV1D-8A0A087WSZ0 117 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 CRYM-AS1A6NIL9 109 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 ZAR1LA6NP61 321 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 USP17L23D6RBM5 183 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 CDK1P06493 297 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 PRSS1P07477 247 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 PI3P19957 117 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 RND2P52198 227 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 KRTAP10-6P60371 365 aaPredicted RBP2.68□□□□□ -1.98
HERC3-213ENST00000598772 MRPL28Q13084 256 aaKnown RBP2.68□□□□□ -1.98
HERC3-213ENST00000598772 CATR1Q13166 79 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 Q499Y3 187 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 C4orf46Q504U0 113 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 PLAC9Q5JTB6 97 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 IDNKQ5T6J7 187 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 HACD4Q5VWC8 232 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 DGAT2L7PQ6IED9 249 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 Q6ZQT7 251 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 INO80EQ8NBZ0 244 aaPredicted RBP2.68□□□□□ -1.98
HERC3-213ENST00000598772 OR5H2Q8NGV7 314 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 Q8TAT8 98 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 LRRC20Q8TCA0 184 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 RNF185Q96GF1 192 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 ACY3Q96HD9 319 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 SLC29A1Q99808 456 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 SLC5A7Q9GZV3 580 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 SLC25A22Q9H936 323 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 KLK12Q9UKR0 248 aa2.68□□□□□ -1.98
HERC3-213ENST00000598772 IGHV3-64A0A075B6Q5 118 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 TRAV1-1A0A0B4J248 108 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 IGHV3-16A0A0C4DH30 117 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 MUC21A0A0G2JKD1 596 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 J3QRE1 110 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 SPINK4O60575 86 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 EDF1O60869 148 aaKnown RBP2.67□□□□□ -1.98
HERC3-213ENST00000598772 HLA-DQA1P01909 254 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 RAP2AP10114 183 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 PSG1P11464 419 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 HRH1P35367 487 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
HERC3-213ENST00000598772 NUP62P37198 522 aaPredicted RBP2.67□□□□□ -1.98
HERC3-213ENST00000598772 GALR1P47211 349 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 UBE2D1P51668 147 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 FXYD4P59646 89 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 LYZP61626 148 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 EIF4EBP1Q13541 118 aaPredicted RBP2.67□□□□□ -1.98
HERC3-213ENST00000598772 POU2AF1Q16633 256 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 GFI1BQ5VTD9 330 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms