RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MANBALQ9NQG1 85 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 SLC39A9Q9NUM3 307 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 RAB4BP61018 213 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 FAM110DQ8TAY7 271 aaPredicted RBP15.29■□□□□ 0.04
LSM4-203ENST00000593829 TRRAPQ9Y4A5 3859 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 CTXND1A0A1B0GTU2 59 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 MARCH11A6NNE9 402 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 PPP5D1E7EU14 171 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 H7BYZ3 331 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 PF4V1P10720 104 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 IAPPP10997 89 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 PSMB3P49720 205 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 RPL8P62917 257 aaKnown RBP15.29■□□□□ 0.04
LSM4-203ENST00000593829 ADIRFQ15847 76 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 NDUFAF3Q9BU61 184 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 PRO1933Q9H354 126 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 TMEM140Q9NV12 185 aa15.29■□□□□ 0.04
LSM4-203ENST00000593829 SOX15O60248 233 aa15.28■□□□□ 0.04
LSM4-203ENST00000593829 GGCTO75223 188 aaKnown RBP15.28■□□□□ 0.04
LSM4-203ENST00000593829 KRASP01116 189 aa15.28■□□□□ 0.04
LSM4-203ENST00000593829 GALR1P47211 349 aa15.28■□□□□ 0.04
LSM4-203ENST00000593829 SLC38A11Q08AI6 406 aa15.28■□□□□ 0.04
LSM4-203ENST00000593829 ACOT6Q3I5F7 207 aaPredicted RBP15.28■□□□□ 0.04
LSM4-203ENST00000593829 RPP25LQ8N5L8 163 aaKnown RBP15.28■□□□□ 0.04
LSM4-203ENST00000593829 KLK15Q9H2R5 256 aa15.28■□□□□ 0.04
LSM4-203ENST00000593829 UPK2O00526 184 aa15.27■□□□□ 0.04
LSM4-203ENST00000593829 IL6RP08887 468 aaPredicted RBP15.27■□□□□ 0.04
LSM4-203ENST00000593829 RAB9AP51151 201 aa15.27■□□□□ 0.04
LSM4-203ENST00000593829 G6PCP35575 357 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 IZUMO4Q1ZYL8 232 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 ACTL10Q5JWF8 245 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 C10orf55Q5SWW7 151 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 KLHL30-AS1Q8NEE0 82 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 MYOZ3Q8TDC0 251 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 BTF3L4Q96K17 158 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 VWFP04275 2813 aa15.27■□□□□ 0.03
LSM4-203ENST00000593829 PKD1L1Q8TDX9 2849 aa15.26■□□□□ 0.03
LSM4-203ENST00000593829 XKRY2A2RUG3 117 aa15.26■□□□□ 0.03
LSM4-203ENST00000593829 RPL27AP46776 148 aaKnown RBP15.26■□□□□ 0.03
LSM4-203ENST00000593829 ASPHD1Q5U4P2 390 aa15.26■□□□□ 0.03
LSM4-203ENST00000593829 OR5T1Q8NG75 326 aa15.26■□□□□ 0.03
LSM4-203ENST00000593829 HSPB7Q9UBY9 170 aa15.26■□□□□ 0.03
LSM4-203ENST00000593829 APELAP0DMC3 54 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 C18orf65Q6ZTR6 163 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 ZNF664Q8N3J9 261 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 TMEM147Q9BVK8 224 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 PARLQ9H300 379 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 TNCP24821 2201 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 TRAV3A0A0B4J244 114 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 SPCS3P61009 180 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 SPANXN5Q5MJ07 72 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 UBE2E2Q96LR5 201 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 ZNF355PQ9NSJ1 428 aa15.25■□□□□ 0.03
LSM4-203ENST00000593829 UBE2L5PA0A1B0GUS4 154 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 P0C879 139 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 ELLP55199 621 aaPredicted RBP15.24■□□□□ 0.03
LSM4-203ENST00000593829 C8orf86Q6ZUL3 223 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 ZNF491Q8N8L2 437 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 TMEM18Q96B42 140 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 MS4A10Q96PG2 267 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 COMMD5Q9GZQ3 224 aa15.24■□□□□ 0.03
LSM4-203ENST00000593829 H3BUA1 57 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 VWC2Q2TAL6 325 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 ACSM6Q6P461 480 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 IMMP2LQ96T52 175 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 TEX22C9J3V5 150 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 E7EUB6 86 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 H2BFWTQ7Z2G1 175 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 C4orf3Q8WVX3 66 aa15.23■□□□□ 0.03
LSM4-203ENST00000593829 WNK1Q9H4A3 2382 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 PMS2P5A8MQ11 134 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 PF4P02776 101 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 OR9G9P0C7N8 305 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 MYOD1P15172 320 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 TPPP2P59282 170 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 RPUSD4Q96CM3 377 aaKnown RBP15.22■□□□□ 0.03
LSM4-203ENST00000593829 MISP3Q96FF7 219 aa15.22■□□□□ 0.03
LSM4-203ENST00000593829 BRI3O95415 125 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 TRGV3P03979 118 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 KCNIP4Q6PIL6 250 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 TTC9CQ8N5M4 171 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 OR10G9Q8NGN4 311 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 OR10G7Q8NGN6 311 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 PRNDQ9UKY0 176 aa15.21■□□□□ 0.03
LSM4-203ENST00000593829 IQCJQ1A5X6 159 aa15.21■□□□□ 0.02
LSM4-203ENST00000593829 GNB4Q9HAV0 340 aa15.21■□□□□ 0.02
LSM4-203ENST00000593829 FKBP11Q9NYL4 201 aa15.21■□□□□ 0.02
LSM4-203ENST00000593829 CIB3Q96Q77 187 aaPredicted RBP15.2■□□□□ 0.02
LSM4-203ENST00000593829 NEU1Q99519 415 aa15.2■□□□□ 0.02
LSM4-203ENST00000593829 QTRT1Q9BXR0 403 aaKnown RBP15.2■□□□□ 0.02
LSM4-203ENST00000593829 TEX50A0A1B0GTY4 177 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 MYCNOSP40205 109 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 ZNF124Q15973 351 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 OR1L8Q8NGR8 309 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 OR4A16Q8NH70 328 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 ZNF257Q9Y2Q1 563 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 OR51B2Q9Y5P1 312 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 CGB1A6NKQ9 187 aa15.19■□□□□ 0.02
LSM4-203ENST00000593829 NPIPB5A8MRT5 1133 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms