RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-241	ENST00000593048	DEFB135	Q30KP9	77 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	ODF3L2	Q3SX64	289 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	SPINK9	Q5DT21	86 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	RNF141	Q8WVD5	230 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	RNF2	Q99496	336 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	FBXL17	Q9UF56	701 aa		11.99	□□□□□ -0.49
CIRBP-241	ENST00000593048	CXorf65	A6NEN9	183 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	CHEK1	O14757	476 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	ATP6V1G1	O75348	118 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	NPBWR1	P48145	328 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	PAX9	P55771	341 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	CMC4	P56277	68 aa	Predicted RBP	11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	SAT2	Q96F10	170 aa	Predicted RBP	11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	GINS3	Q9BRX5	216 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	PSENEN	Q9NZ42	101 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	TP53TG1	Q9Y2A0	90 aa		11.98	□□□□□ -0.49
CIRBP-241	ENST00000593048	KIR2DL5B	A0A0G2JN68	375 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	KIR2DL5B	A0A0G2JPC4	375 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048		A0A0J9YWU9	116 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	SUB1	P53999	127 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	PAFAH1B2	P68402	229 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	PMS2P11	Q13670	270 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	TMEM14EP	Q6UXP3	125 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	KIR2DL5A	Q8N109	375 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	OR1S2	Q8NGQ3	325 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	KIR2DL5B	Q8NHK3	375 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	ENY2	Q9NPA8	101 aa		11.97	□□□□□ -0.49
CIRBP-241	ENST00000593048	IGHV3OR16-13	A0A075B7E8	117 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	IGHV3-74	A0A0B4J1X5	117 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	INS-IGF2	F8WCM5	200 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	ALKAL2	Q6UX46	152 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	WFDC3	Q8IUB2	231 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	APRG1	Q8IVJ8	170 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	GBGT1	Q8N5D6	347 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	DTD1	Q8TEA8	209 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	GGACT	Q9BVM4	153 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	MAGT1	Q9H0U3	335 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	RBKS	Q9H477	322 aa		11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	STRAP	Q9Y3F4	350 aa	Known RBP	11.96	□□□□□ -0.49
CIRBP-241	ENST00000593048	IGSF23	A1L1A6	192 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	FAM24A	A6NFZ4	105 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	UMAD1	C9J7I0	102 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	TMEM50A	O95807	157 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	NMB	P08949	121 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	HOXA1	P49639	335 aa	Predicted RBP	11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	BLOC1S1	P78537	153 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	RPL7L1	Q6DKI1	246 aa	Known RBP	11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	TOMM20L	Q6UXN7	152 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	RNF183	Q96D59	192 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	ATP5S	Q99766	215 aa		11.95	□□□□□ -0.5
CIRBP-241	ENST00000593048	DNASE2	O00115	360 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	CORT	O00230	105 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	IFNA5	P01569	189 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	CD5	P06127	495 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	SPP1	P10451	314 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	SULT1A2	P50226	295 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	RPL11	P62913	178 aa	Known RBP	11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	NHLH2	Q02577	135 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	ZNF600	Q6ZNG1	722 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	TCF24	Q7RTU0	167 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	EIF4E3	Q8N5X7	224 aa	Known RBP	11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	OR5C1	Q8NGR4	320 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	MAP6D1	Q9H9H5	199 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	PFDN2	Q9UHV9	154 aa		11.94	□□□□□ -0.5
CIRBP-241	ENST00000593048	CEBPZOS	A8MTT3	80 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	SCGB2A1	O75556	95 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	DPPA3	Q6W0C5	159 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	TMEM217	Q8N7C4	229 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	OR10P1	Q8NGE3	313 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	ZNF414	Q96IQ9	312 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	CSTL1	Q9H114	145 aa		11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CIRBP-241	ENST00000593048	PLEC	Q15149	4684 aa	Known RBP	11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	IGHV3-66	A0A0C4DH42	116 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	NUPR2	A6NF83	97 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	FNDC10	F2Z333	226 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	OPRK1	P41145	380 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	RAB11A	P62491	216 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	ZNF124	Q15973	351 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	FAM90A2P	Q658T7	463 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	PSMG3	Q9BT73	122 aa	Predicted RBP	11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	TMEM231	Q9H6L2	316 aa		11.92	□□□□□ -0.5
CIRBP-241	ENST00000593048	APOH	P02749	345 aa	Predicted RBP	11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	RNASE2	P10153	161 aa	Known RBP	11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	SERF2	P84101	59 aa		11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	SPANXN5	Q5MJ07	72 aa		11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	SCGB1C1	Q8TD33	95 aa		11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	FAM210A	Q96ND0	272 aa		11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048	TIMM9	Q9Y5J7	89 aa		11.91	□□□□□ -0.5
CIRBP-241	ENST00000593048		A0A1W2PS18	150 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	MPDU1	O75352	247 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	CST7	O76096	145 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	LY6G6C	O95867	125 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	IAPP	P10997	89 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	NPPC	P23582	126 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	VWC2	Q2TAL6	325 aa		11.9	□□□□□ -0.5
CIRBP-241	ENST00000593048	TMED6	Q8WW62	240 aa		11.9	□□□□□ -0.5

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