RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 SLIT2O94813 1529 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 TRAV27A0A087WT01 109 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 TRAV8-6A0A0B4J262 113 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 DPRXA6NFQ7 191 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 H3BUT2 72 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 J3QQQ9 107 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 K7ENP7 123 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 SSSCA1O60232 199 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 DUSP14O95147 198 aaKnown RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 IGHG2P01859 326 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 PRH1P02810 166 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 CD3DP04234 171 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 SLC25A5P05141 298 aaKnown RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 CXCL1P09341 107 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 P0DMU3 169 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 FAM231AP0DMU4 169 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 FAM231CP0DMU5 169 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 PYYP10082 97 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 ZNF708P17019 499 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 PSMB8P28062 276 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 BTCP35070 178 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 CXCL5P42830 114 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 KLK7P49862 253 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 SUB1P53999 127 aaKnown RBP eCLIP2.59□□□□□ -1.99
VMP1-212ENST00000591782 SLC25A11Q02978 314 aaKnown RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 LOXL1Q08397 574 aaPredicted RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 SLC38A11Q08AI6 406 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 RTL8BQ17RB0 113 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 Q1RN00 199 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 MPV17LQ2QL34 196 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 C12orf74Q32Q52 190 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 TDRG1Q3Y452 100 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 LINC00242Q5T6M2 205 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 LINC01545Q5VT33 79 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 LCN12Q6JVE5 192 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 AAED1Q7RTV5 226 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 BAGE3Q86Y29 109 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 BAGE2Q86Y30 109 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 C11orf53Q8IXP5 236 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 ZNF101Q8IZC7 436 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 SLC22A18ASQ8N1D0 253 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 DRAM1Q8N682 238 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 CD177Q8N6Q3 437 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 MDS2Q8NDY4 140 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 KLHL30-AS1Q8NEE0 82 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 OR8B3Q8NGG8 313 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 OR5H2Q8NGV7 314 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 OTOSQ8NHW6 89 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 MRPL30Q8TCC3 161 aaKnown RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 KCNS1Q96KK3 526 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 NMNAT3Q96T66 252 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 RTBDNQ9BSG5 229 aaPredicted RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 POLR2J2Q9GZM3 115 aaKnown RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 IKZF5Q9H5V7 419 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 Q9HAA7 133 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 TVP23BQ9NYZ1 205 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 ZNF256Q9Y2P7 627 aaPredicted RBP2.59□□□□□ -1.99
VMP1-212ENST00000591782 LINC00312Q9Y6C7 94 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 MIA3Q5JRA6 1907 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 ALPK3Q96L96 1907 aa2.59□□□□□ -1.99
VMP1-212ENST00000591782 NYNRINQ9P2P1 1898 aaKnown RBP2.58□□□□□ -2
VMP1-212ENST00000591782 LRRC37A3O60309 1634 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ADAMTS7Q9UKP4 1686 aa2.58□□□□□ -2
VMP1-212ENST00000591782 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
VMP1-212ENST00000591782 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
VMP1-212ENST00000591782 A8MWV9 139 aa2.58□□□□□ -2
VMP1-212ENST00000591782 SYS1-DBNDD2H3BUS1 97 aa2.58□□□□□ -2
VMP1-212ENST00000591782 K7N7A8 449 aa2.58□□□□□ -2
VMP1-212ENST00000591782 M0R2P5 195 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ATOX1O00244 68 aa2.58□□□□□ -2
VMP1-212ENST00000591782 MRPS12O15235 138 aaKnown RBP2.58□□□□□ -2
VMP1-212ENST00000591782 YPEL1O60688 119 aa2.58□□□□□ -2
VMP1-212ENST00000591782 MT-ATP8P03928 68 aa2.58□□□□□ -2
VMP1-212ENST00000591782 LGALS2P05162 132 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ZNF688P0C7X2 276 aa2.58□□□□□ -2
VMP1-212ENST00000591782 SMIM13P0DJ93 91 aa2.58□□□□□ -2
VMP1-212ENST00000591782 CRYGAP11844 174 aa2.58□□□□□ -2
VMP1-212ENST00000591782 CRISP2P16562 243 aa2.58□□□□□ -2
VMP1-212ENST00000591782 RPL34P49207 117 aaKnown RBP2.58□□□□□ -2
VMP1-212ENST00000591782 APOC4P55056 127 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
VMP1-212ENST00000591782 YPEL3P61236 119 aaPredicted RBP2.58□□□□□ -2
VMP1-212ENST00000591782 DAD1P61803 113 aa2.58□□□□□ -2
VMP1-212ENST00000591782 NPC2P61916 151 aa2.58□□□□□ -2
VMP1-212ENST00000591782 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
VMP1-212ENST00000591782 ZNF85Q03923 595 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ADIGQ0VDE8 80 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ZNF791Q3KP31 576 aaPredicted RBP2.58□□□□□ -2
VMP1-212ENST00000591782 FAM219BQ5XKK7 198 aa2.58□□□□□ -2
VMP1-212ENST00000591782 SH2D6Q7Z4S9 175 aa2.58□□□□□ -2
VMP1-212ENST00000591782 RPS19BP1Q86WX3 136 aaKnown RBP2.58□□□□□ -2
VMP1-212ENST00000591782 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
VMP1-212ENST00000591782 ZIC4Q8N9L1 334 aa2.58□□□□□ -2
VMP1-212ENST00000591782 OR2T10Q8NGZ9 312 aa2.58□□□□□ -2
VMP1-212ENST00000591782 OR52P1PQ8NH57 321 aa2.58□□□□□ -2
VMP1-212ENST00000591782 C18orf32Q8TCD1 76 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms