RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SGMS2Q8NHU3 365 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 VN1R17PQ8TDU5 208 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 FANCD2OSQ96PS1 177 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
LIG3-204ENST00000585740 MEGF9Q9H1U4 602 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 C21orf62Q9NYP8 219 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 MRPL27Q9P0M9 148 aaKnown RBP8.88□□□□□ -0.99
LIG3-204ENST00000585740 CDC42EP3Q9UKI2 254 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 TACC2O95359 2948 aa8.88□□□□□ -0.99
LIG3-204ENST00000585740 DCHS2Q6V1P9 2916 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 IGHV4-30-2A0A087WSY4 118 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 A0A1W2PPQ1 181 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 TRGC2P03986 189 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 S100A8P05109 93 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 MSMBP08118 114 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H1EP10412 219 aaKnown RBP8.87□□□□□ -0.99
LIG3-204ENST00000585740 GP9P14770 177 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 MYCNOSP40205 109 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 FBLN7Q53RD9 439 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 FAM120AOSQ5T036 256 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 RUSC1-AS1Q66K80 236 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 GAR1Q9NY12 217 aaKnown RBP8.87□□□□□ -0.99
LIG3-204ENST00000585740 MOB4Q9Y3A3 225 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 FBN3Q75N90 2809 aa8.87□□□□□ -0.99
LIG3-204ENST00000585740 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 WI2-2373I1.2A0A1W2PRP0 233 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 PGPEP1LA6NFU8 196 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 B4DSR2 109 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 H3BRN7 92 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 GCGP01275 180 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
LIG3-204ENST00000585740 AKR1D1P51857 326 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 Q56UQ5 140 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 UNQ5815/PRO19632Q6UWF5 114 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 BPIFA4PQ86YQ2 179 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 RNF125Q96EQ8 232 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 GSX1Q9H4S2 264 aaPredicted RBP8.86□□□□□ -0.99
LIG3-204ENST00000585740 OTORQ9NRC9 128 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 IL36BQ9NZH7 164 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 AKAP6Q13023 2319 aa8.86□□□□□ -0.99
LIG3-204ENST00000585740 PGPA6NDG6 321 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 K7EN84 100 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 ISLRO14498 428 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 NDUFB8O95169 186 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 SLC25A5P05141 298 aaKnown RBP8.85□□□□□ -0.99
LIG3-204ENST00000585740 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 FABP9Q0Z7S8 132 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 TMEM183BQ1AE95 376 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 RPEL1Q2QD12 228 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 COX19Q49B96 90 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 ZNF600Q6ZNG1 722 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 LYPD1Q8N2G4 141 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 C5orf56Q8N8D9 126 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 OR4F17Q8NGA8 305 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 BLNKQ8WV28 456 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 AURKAIP1Q9NWT8 199 aaPredicted RBP8.85□□□□□ -0.99
LIG3-204ENST00000585740 FBXL7Q9UJT9 491 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 ABCA2Q9BZC7 2435 aa8.85□□□□□ -0.99
LIG3-204ENST00000585740 TRAV40A0A0B4J280 105 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 A0A0U1RQK1 487 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 ZNF320A2RRD8 509 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 OR2J3O76001 311 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 IL4P05112 153 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HOXA5P20719 270 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HNF1AP20823 631 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 CRIP2P52943 208 aaPredicted RBP8.84□□□□□ -0.99
LIG3-204ENST00000585740 NDUFA6P56556 154 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 UBE2G1P62253 170 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 RANP62826 216 aaKnown RBP8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 KLF17Q5JT82 389 aaPredicted RBP8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
LIG3-204ENST00000585740 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 ATP6V0BQ99437 205 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 HSPB9Q9BQS6 159 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 ATG101Q9BSB4 218 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 Q9H3A6 140 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 SPG11Q96JI7 2443 aa8.84□□□□□ -0.99
LIG3-204ENST00000585740 ABCA1O95477 2261 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms