RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 CX3CL1P78423 397 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 COX19Q49B96 90 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 RBM14Q96PK6 669 aaKnown RBP13.84□□□□□ -0.19
TMCO1-207ENST00000580248 TBX15Q96SF7 602 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 THYN1Q9P016 225 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 MRPL27Q9P0M9 148 aaKnown RBP13.84□□□□□ -0.19
TMCO1-207ENST00000580248 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 NCBP2LA6PVI3 153 aaKnown RBP13.84□□□□□ -0.19
TMCO1-207ENST00000580248 TOMM40O96008 361 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 LYZP61626 148 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 EPDR1Q9UM22 224 aa13.84□□□□□ -0.19
TMCO1-207ENST00000580248 IGLV11-55A0A075B6I3 123 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 IGKV1-17P01599 117 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 CD24P25063 80 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 TMEM183BQ1AE95 376 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 FAM231DQ6ZW35 169 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 KRTAP1-3Q8IUG1 177 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 CHRDL1Q9BU40 450 aa13.83□□□□□ -0.2
TMCO1-207ENST00000580248 SLC25A39Q9BZJ4 359 aaPredicted RBP13.83□□□□□ -0.2
TMCO1-207ENST00000580248 TRBV9A0A0B4J1U6 114 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 SCGB2A1O75556 95 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 HIST1H1BP16401 226 aaKnown RBP13.82□□□□□ -0.2
TMCO1-207ENST00000580248 MFAP4P55083 255 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
TMCO1-207ENST00000580248 OR5I1Q13606 314 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 IBA57Q5T440 356 aaKnown RBP13.82□□□□□ -0.2
TMCO1-207ENST00000580248 TMEM68Q96MH6 324 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 FOXC2Q99958 501 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 GPR61Q9BZJ8 451 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
TMCO1-207ENST00000580248 ASH1LQ9NR48 2969 aaKnown RBP13.82□□□□□ -0.2
TMCO1-207ENST00000580248 PDZD2O15018 2839 aa13.82□□□□□ -0.2
TMCO1-207ENST00000580248 XKRY2A2RUG3 117 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 PGPA6NDG6 321 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 SLC17A3O00476 420 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 PLXNB1O43157 2135 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 SLC25A5P05141 298 aaKnown RBP13.81□□□□□ -0.2
TMCO1-207ENST00000580248 HIST1H1EP10412 219 aaKnown RBP13.81□□□□□ -0.2
TMCO1-207ENST00000580248 ASPHD1Q5U4P2 390 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 C5orf17Q8NAS9 161 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
TMCO1-207ENST00000580248 KLF12Q9Y4X4 402 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 A0A096LNT2 108 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 PCP4L1A6NKN8 68 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 MGST1P10620 155 aaKnown RBP13.81□□□□□ -0.2
TMCO1-207ENST00000580248 UBE2G1P62253 170 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 GFI1BQ5VTD9 330 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 BAGE2Q86Y30 109 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 BLNKQ8WV28 456 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 FANCD2OSQ96PS1 177 aa13.81□□□□□ -0.2
TMCO1-207ENST00000580248 ITPR2Q14571 2701 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 ARHGAP32A7KAX9 2087 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 GNG7O60262 68 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 ZNF600Q6ZNG1 722 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 Q8N9W7 124 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 FMC1Q96HJ9 113 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 Q96MF0 132 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 ATG101Q9BSB4 218 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 SHANK2-AS3Q9BTD1 123 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 NIT2Q9NQR4 276 aa13.8□□□□□ -0.2
TMCO1-207ENST00000580248 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 H3BRN7 92 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 LOXL1Q08397 574 aaPredicted RBP13.79□□□□□ -0.2
TMCO1-207ENST00000580248 KLK9Q2XQG4 91 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 FBLN7Q53RD9 439 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 OR10D4PQ8NGN7 298 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 TXN2Q99757 166 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 RNASE7Q9H1E1 156 aaKnown RBP13.79□□□□□ -0.2
TMCO1-207ENST00000580248 OTORQ9NRC9 128 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 KLK9Q9UKQ9 250 aa13.79□□□□□ -0.2
TMCO1-207ENST00000580248 IGHV7-81A0A0B4J1V7 117 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 RNF223E7ERA6 249 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 NPFFO15130 113 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 SAA4P35542 130 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 WDR73Q6P4I2 378 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 RNF125Q96EQ8 232 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 Q9H3A6 140 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 VPS13CQ709C8 3753 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 MT-ND6P03923 174 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
TMCO1-207ENST00000580248 PAX8Q06710 450 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 LYPD1Q8N2G4 141 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 C21orf62Q9NYP8 219 aa13.78□□□□□ -0.2
TMCO1-207ENST00000580248 ZNF705GA8MUZ8 300 aaPredicted RBP13.77□□□□□ -0.21
TMCO1-207ENST00000580248 FABP4P15090 132 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 S100A7P31151 101 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 NDPQ00604 133 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 OR4F17Q8NGA8 305 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 LINC00479Q96M42 142 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 GPR82Q96P67 336 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 HIST1H2BLQ99880 126 aa13.77□□□□□ -0.21
TMCO1-207ENST00000580248 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms