RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 VPREB3Q9UKI3 123 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 GGTLC3B5MD39 225 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 AP4M1O00189 453 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 IL4P05112 153 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 ZNF674Q2M3X9 581 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 NOL4LQ96MY1 436 aaPredicted RBP17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 NAT8Q9UHE5 227 aa17.54■□□□□ 0.4
VCPKMT-205ENST00000569518 SCO2A0A1W2PP80 73 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 FAM223BA6NKX1 122 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 SCGB2A1O75556 95 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 NDUFB4O95168 129 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 KRTAP1-1Q07627 177 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 ZNF343Q6P1L6 599 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 FAM223AQ8IWN6 122 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 Q8WTZ3 238 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 SHANK2-AS3Q9BTD1 123 aa17.53■□□□□ 0.4
VCPKMT-205ENST00000569518 TLN2Q9Y4G6 2542 aa17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 H3BRN7 92 aa17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 H3BUA1 57 aa17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 USF2Q15853 346 aaPredicted RBP17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 LEMD1Q68G75 181 aa17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 DERL1Q9BUN8 251 aa17.52■□□□□ 0.4
VCPKMT-205ENST00000569518 TRBV7-1A0A0A6YYK4 115 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 GPR183P32249 361 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 CFHR3Q02985 330 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 TMEM241Q24JQ0 296 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 EEF1AKMT3Q96AZ1 226 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 GAR1Q9NY12 217 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 ATP6V0BQ99437 205 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 SMCO4Q9NRQ5 59 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 TMEM14CQ9P0S9 112 aa17.51■□□□□ 0.39
VCPKMT-205ENST00000569518 A0A087WWC5 75 aa17.5■□□□□ 0.39
VCPKMT-205ENST00000569518 B4DEV8 164 aa17.5■□□□□ 0.39
VCPKMT-205ENST00000569518 CLEC3BP05452 202 aa17.5■□□□□ 0.39
VCPKMT-205ENST00000569518 ATP5G2Q06055 141 aa17.5■□□□□ 0.39
VCPKMT-205ENST00000569518 TRGV3P03979 118 aa17.49■□□□□ 0.39
VCPKMT-205ENST00000569518 TEX29Q8N6K0 151 aa17.49■□□□□ 0.39
VCPKMT-205ENST00000569518 HOXA3O43365 443 aaPredicted RBP17.49■□□□□ 0.39
VCPKMT-205ENST00000569518 IGLV1-40P01703 118 aa17.49■□□□□ 0.39
VCPKMT-205ENST00000569518 MYCNOSP40205 109 aa17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 RPL23P62829 140 aaKnown RBP17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 CLEC19AQ6UXS0 136 aa17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 ZNF600Q6ZNG1 722 aa17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 TUBA4BQ9H853 241 aa17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 AKAP9Q99996 3911 aa17.48■□□□□ 0.39
VCPKMT-205ENST00000569518 TRBV20OR9-2A0A075B6H5 130 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 SUMO1P63165 101 aaKnown RBP17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 ELOVL1Q9BW60 279 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 TGOLN2O43493 480 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 NBEAP1P0C6P0 100 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 TPPP2P59282 170 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 TMEM95Q3KNT9 176 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 IL17RELQ6ZVW7 336 aa17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 TMA7Q9Y2S6 64 aaKnown RBP17.47■□□□□ 0.39
VCPKMT-205ENST00000569518 CD5LO43866 347 aa17.46■□□□□ 0.39
VCPKMT-205ENST00000569518 ZNF329Q86UD4 541 aa17.46■□□□□ 0.39
VCPKMT-205ENST00000569518 C2CD4CQ8TF44 421 aa17.46■□□□□ 0.39
VCPKMT-205ENST00000569518 ZFAND3Q9H8U3 227 aa17.46■□□□□ 0.39
VCPKMT-205ENST00000569518 ZNF98A6NK75 572 aa17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 MRPS12O15235 138 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 SNRPCP09234 159 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 CRYBB3P26998 211 aa17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 ADIRFQ15847 76 aa17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 S100A7AQ86SG5 101 aa17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 USMG5Q96IX5 58 aa17.45■□□□□ 0.38
VCPKMT-205ENST00000569518 TSPAN4O14817 238 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 HIST1H1EP10412 219 aaKnown RBP17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 TOMM20LQ6UXN7 152 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 SIGLECL1Q8N7X8 197 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 BLNKQ8WV28 456 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 KLK15Q9H2R5 256 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 IGLC2P0DOY2 106 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 RPL35P42766 123 aaKnown RBP17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 LINC01551Q86U37 167 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 BPIFA4PQ86YQ2 179 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 TCEAL7Q9BRU2 100 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 ZNF586Q9NXT0 402 aa17.44■□□□□ 0.38
VCPKMT-205ENST00000569518 IGHV3-35A0A0C4DH35 117 aa17.43■□□□□ 0.38
VCPKMT-205ENST00000569518 COLCA2A8K830 154 aa17.43■□□□□ 0.38
VCPKMT-205ENST00000569518 RANP62826 216 aaKnown RBP17.43■□□□□ 0.38
VCPKMT-205ENST00000569518 ISOC2Q96AB3 205 aa17.43■□□□□ 0.38
VCPKMT-205ENST00000569518 C9JCJ5 164 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 BMPR1BO00238 502 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 PF4V1P10720 104 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 C15orf54Q8N8G6 183 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 YPEL4Q96NS1 127 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 ZNF702PQ9H963 129 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 TMEM242Q9NWH2 141 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 RABAC1Q9UI14 185 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 SONP18583 2426 aaKnown RBP17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 IGHG4P01861 327 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 RNF212Q495C1 297 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 PRSS22Q9GZN4 317 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 NPFFR1Q9GZQ6 430 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 GNB4Q9HAV0 340 aa17.42■□□□□ 0.38
VCPKMT-205ENST00000569518 ACANP16112 2415 aa17.41■□□□□ 0.38
VCPKMT-205ENST00000569518 PPP5D1E7EU14 171 aa17.41■□□□□ 0.38
VCPKMT-205ENST00000569518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.4■□□□□ 0.38
VCPKMT-205ENST00000569518 CLPSL1A2RUU4 121 aa17.4■□□□□ 0.38
VCPKMT-205ENST00000569518 CXorf65A6NEN9 183 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms